RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PCDHGA7Q9Y5G6 932 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ALG6Q9Y672 507 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 HELZ2Q9BYK8 2649 aaKnown RBP10.96□□□□□ -0.66
SSBP3-206ENST00000420121 TEX51A0A1B0GUA7 166 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 A6NCN8 305 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 TMX2-CTNND1H3BSU7 103 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 ATXN7O15265 892 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-206ENST00000420121 PSTPIP1O43586 416 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 C1QL1O75973 258 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 PYGLP06737 847 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 PIRTP0C851 137 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 TNNT1P13805 278 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 ZFXP17010 805 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-206ENST00000420121 ITIH1P19827 911 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 CD1CP29017 333 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 SLC5A2P31639 672 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 CSF2RBP32927 897 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 MAGEA1P43355 309 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 CLN3Q13286 438 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 C16orf72Q14CZ0 275 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 LLGL1Q15334 1064 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 TEX44Q53QW1 395 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 SPOCD1Q6ZMY3 1216 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 MARK2Q7KZI7 788 aaKnown RBP10.95□□□□□ -0.66
SSBP3-206ENST00000420121 TMC3Q7Z5M5 1100 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 NT5DC3Q86UY8 548 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 GPR26Q8NDV2 337 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 TEKT5Q96M29 485 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 NUDT22Q9BRQ3 303 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 FAM83DQ9H4H8 585 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 GLOD4Q9HC38 313 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 HAUS2Q9NVX0 235 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 VPS18Q9P253 973 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 NFKBIL1Q9UBC1 381 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-206ENST00000420121 PRKAB1Q9Y478 270 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 LOXL2Q9Y4K0 774 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 SPO11Q9Y5K1 396 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 ADGRG1Q9Y653 693 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 PIEZO2Q9H5I5 2752 aa10.95□□□□□ -0.66
SSBP3-206ENST00000420121 hCG_1818297A0A087WSY0 165 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 IGHV1OR21-1A0A087WYE8 117 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 RGSL1A5PLK6 1076 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 RCCD1A6NED2 376 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 AURKAO14965 403 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 PPP1R12AO14974 1030 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-206ENST00000420121 EFSO43281 561 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 SPOPO43791 374 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 CST8O60676 142 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 CPNE6O95741 557 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 PRB1P04280 392 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 FECHP22830 423 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 ALDH4A1P30038 563 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 GPR3P46089 330 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 FASLGP48023 281 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 NR2C2P49116 596 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 ARSDP51689 593 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 TMPRSS3P57727 454 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 DCDC1P59894 354 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 CDK18Q07002 472 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 SQSTM1Q13501 440 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 LRP8Q14114 963 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-206ENST00000420121 KDELC1Q6UW63 502 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 KDELC2Q7Z4H8 507 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 GALNT13Q8IUC8 556 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 KATNAL2Q8IYT4 538 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 SFRP1Q8N474 314 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 SLC37A2Q8TED4 501 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 KRT35Q92764 455 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 HERPUD2Q9BSE4 406 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 MAK16Q9BXY0 300 aaKnown RBP10.94□□□□□ -0.66
SSBP3-206ENST00000420121 ADGRE3Q9BY15 652 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 TRIM5Q9C035 493 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 STRADBQ9C0K7 418 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 ZFYVE1Q9HBF4 777 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 MAGEE1Q9HCI5 957 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 PKD2L2Q9NZM6 624 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 SEPT10Q9P0V9 454 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 ATXN10Q9UBB4 475 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 PISDQ9UG56 409 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 TMPRSS11EQ9UL52 423 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 SHOC2Q9UQ13 582 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 ZNF711Q9Y462 761 aa10.94□□□□□ -0.66
SSBP3-206ENST00000420121 COL6A6A6NMZ7 2263 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 A0A0A6YYK5 440 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 IGHV5-10-1A0A0J9YXX1 117 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 PRR19A6NJB7 356 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 RHPN2P1A8MT19 583 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 C9orf172C9J069 976 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 K7ENP7 123 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 AGRPO00253 132 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 NVLO15381 856 aaKnown RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 NUAK1O60285 661 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 ASMTLO95671 621 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 BPIP17213 487 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 UCNP55089 124 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 VAC14Q08AM6 782 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 SRSF6Q13247 344 aaKnown RBP10.93□□□□□ -0.66
SSBP3-206ENST00000420121 NOMO1Q15155 1222 aa10.93□□□□□ -0.66
SSBP3-206ENST00000420121 TGIF1Q15583 401 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms