RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ATP6V0D1P61421 351 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 NR0B2Q15466 257 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 R3HCC1LQ7Z5L2 792 aaKnown RBP16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 USE1Q9NZ43 259 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 KLHL20Q9Y2M5 609 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 MCIDASD6RGH6 385 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 TCN1P20061 433 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 RPL22P35268 128 aaKnown RBP16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 NUDT2P50583 147 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 HNRNPKP61978 463 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■■□□ 15.7
SYNGAP1-202ENST00000418600 NTHL1P78549 312 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 CYTH1Q15438 398 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 LRRC74BQ6ZQY2 392 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 CLEC17AQ6ZS10 378 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 ZNF599Q96NL3 588 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 SLC25A51Q9H1U9 297 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 CIDEBQ9UHD4 219 aa16.86■□□□□ 0.29
SYNGAP1-202ENST00000418600 RBM47A0AV96 593 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 NRG3P56975 720 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 TBX2Q13207 712 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 ZNF621Q6ZSS3 439 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 GJD3Q8N144 294 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 MRPL43Q8N983 215 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 LRRC39Q96DD0 335 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 RBM18Q96H35 190 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 EXOSC4Q9NPD3 245 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 FFAR3O14843 346 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 GPR42O15529 346 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 SEMG2Q02383 582 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 TAF1AQ15573 450 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 IMPAD1Q9NX62 359 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 PHGDHO43175 533 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 LSM12Q3MHD2 195 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 RNF43Q68DV7 783 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 RAB7BQ96AH8 199 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 SEMA3GQ9NS98 782 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 PAPSS1O43252 624 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 HGFP14210 728 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 CHN1P15882 459 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 IYDQ6PHW0 289 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 CNBD2Q96M20 576 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 PCDH12Q9NPG4 1184 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 HCN2Q9UL51 889 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 USP15Q9Y4E8 981 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 FAM220BPB1ANY3 271 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 TMX2-CTNND1H3BSU7 103 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 SLC29A2Q14542 456 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 RIN3Q8TB24 985 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 PMEPA1Q969W9 287 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 R3HDMLQ9H3Y0 253 aa16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 POLR3BQ9NW08 1133 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-202ENST00000418600 NPEPPSL1A6NEC2 478 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 KMOO15229 486 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 EPN2O95208 641 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 OTCP00480 354 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SERPINB5P36952 375 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 NUP62P37198 522 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 IFNGR2P38484 337 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 CLK1P49759 484 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 RPS15P62841 145 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 MLF2Q15773 248 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 FAM20CQ8IXL6 584 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 WDR92Q96MX6 357 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 APOBEC3BQ9UH17 382 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 CRATP43155 626 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 PTGR2Q8N8N7 351 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 OR2T3Q8NH03 318 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 KREMEN1Q96MU8 473 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 GBA3Q9H227 469 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SOX13Q9UN79 622 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 DUSP10Q9Y6W6 482 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 KIAA0355O15063 1070 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 HEXBP07686 556 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 PRLRP16471 622 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 FBXL22Q6P050 247 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 PRR11Q96HE9 360 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 GFM1Q96RP9 751 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 MRPS26Q9BYN8 205 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SCML1Q9UN30 329 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 COL22A1Q8NFW1 1626 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 hCG_1818297A0A087WSY0 165 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 UBDO15205 165 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 PLK1P53350 603 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 MRPS22P82650 360 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SMAD4Q13485 552 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 CLEC4CQ8WTT0 213 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 C19orf60Q96EN9 201 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SPATA5L1Q9BVQ7 753 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SMOC2Q9H3U7 446 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 TBC1D17Q9HA65 648 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 RC3H2Q9HBD1 1191 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 SLC24A2Q9UI40 661 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
SYNGAP1-202ENST00000418600 TSPAN6O43657 245 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms