RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TSGA10Q9BZW7 698 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 TAAR2Q9P1P5 351 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 ZFC3H1O60293 1989 aaKnown RBP20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 ANKRD11Q6UB99 2663 aaPredicted RBP20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 A0A1W2PQM1 296 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 C5orf60A6NFR6 353 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 KCNN4O15554 427 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 RPIAP49247 311 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 CYP4F3Q08477 520 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 CERCAMQ5T4B2 595 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 KCTD11Q693B1 232 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 DARS2Q6PI48 645 aaKnown RBP20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 SLC25A41Q8N5S1 370 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 TRAM1L1Q8N609 369 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 IPMKQ8NFU5 416 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 NAT6Q93015 286 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 NRSN2Q9GZP1 204 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 IL17CQ9P0M4 197 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 GULP1Q9UBP9 304 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 MOSPD1Q9UJG1 213 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 APPL1Q9UKG1 709 aa20.45■□□□□ 0.86
PKNOX1-202ENST00000418336 PRR19A6NJB7 356 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 KRT86O43790 486 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 EML2O95834 649 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 HLA-DPA1P20036 260 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 NR1D2Q14995 579 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 SIX1Q15475 284 aaPredicted RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 KHDC1Q4VXA5 237 aaKnown RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 C14orf28Q4W4Y0 310 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 ZNF648Q5T619 568 aaPredicted RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 CCDC181Q5TID7 509 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 ALS2CLQ60I27 953 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 ZNF438Q7Z4V0 828 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 NAGSQ8N159 534 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 FAM46DQ8NEK8 389 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 DTX3LQ8TDB6 740 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 PATE1Q8WXA2 126 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 SCG3Q8WXD2 468 aaKnown RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 PLEKHG4BQ96PX9 1271 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 OR2M4Q96R27 311 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 SRPK1Q96SB4 655 aaKnown RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 ZSCAN5AQ9BUG6 496 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 GPR63Q9BZJ6 419 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 CDH19Q9H159 772 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 TRABDQ9H4I3 376 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 CCDC86Q9H6F5 360 aaKnown RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 SUDS3Q9H7L9 328 aaPredicted RBP20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 IL26Q9NPH9 171 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 EVA1BQ9NVM1 165 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 DOLKQ9UPQ8 538 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 RNF215Q9Y6U7 377 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 ACACAQ13085 2346 aa20.44■□□□□ 0.86
PKNOX1-202ENST00000418336 A6NCN8 305 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 KRT37O76014 449 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 METTL18O95568 372 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 PNLIPP16233 465 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 MAZP56270 477 aaKnown RBP20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 OASLQ15646 514 aaKnown RBP20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 ISXQ2M1V0 245 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 PDPK2PQ6A1A2 396 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 ITPRIPL1Q6GPH6 555 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 MARK2Q7KZI7 788 aaKnown RBP20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 ADGRG6Q86SQ4 1221 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 TTC13Q8NBP0 860 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 RTP4Q96DX8 246 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 FICDQ9BVA6 458 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 GSDMCQ9BYG8 508 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 GRPEL1Q9HAV7 217 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 BPIFA1Q9NP55 256 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 ATXN10Q9UBB4 475 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 PRKAB1Q9Y478 270 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 ENTPD2Q9Y5L3 495 aa20.43■□□□□ 0.86
PKNOX1-202ENST00000418336 B4DGG1 531 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 CHUKO15111 745 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 NUAK1O60285 661 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 CSO75390 466 aaKnown RBP20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 TCEA3O75764 348 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 ANXA9O76027 345 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 SLC4A1P02730 911 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 GLB1P16278 677 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 ZNF8P17098 575 aaPredicted RBP20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 CETN2P41208 172 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 GEMP55040 296 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 ILF3Q12906 894 aaKnown RBP eCLIP20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 PTPRCAPQ14761 206 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 ATG4AQ8WYN0 398 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 GLYATL1Q969I3 302 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 PRR11Q96HE9 360 aaPredicted RBP20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 VPS35Q96QK1 796 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 SPATA16Q9BXB7 569 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 TLR10Q9BXR5 811 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 DPEP2Q9H4A9 486 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 ARNT2Q9HBZ2 717 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 ARFGAP3Q9NP61 516 aa20.42■□□□□ 0.86
PKNOX1-202ENST00000418336 PMS2P1A4D2B8 440 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 GPR39O43194 453 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 NUDT21O43809 227 aaKnown RBP20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 CCDC175P0C221 793 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 CCL7P80098 99 aa20.41■□□□□ 0.86
PKNOX1-202ENST00000418336 B4GALNT1Q00973 533 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms