RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 YWHAHQ04917 246 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 MBTD1Q05BQ5 628 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ITGA9Q13797 1035 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 GTF2H3Q13889 308 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 HLTFQ14527 1009 aaKnown RBP eCLIP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 STARD3Q14849 445 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 STX1AQ16623 288 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 MGAT5BQ3V5L5 792 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ACCSLQ4AC99 568 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 GLE1Q53GS7 698 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKRD20A2Q5SQ80 823 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKRD20A1Q5TYW2 823 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKRD20A3Q5VUR7 823 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 DENND2CQ68D51 928 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 PLA2G4FQ68DD2 849 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 OR52E8Q6IFG1 317 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TIGD7Q6NT04 549 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TUBA3EQ6PEY2 450 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TEPPQ6URK8 271 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ARHGEF18Q6ZSZ5 1173 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 UNC13DQ70J99 1090 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 CROCCP3Q8IVE0 287 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TERB1Q8NA31 727 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TOR1AIP2Q8NFQ8 470 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TNIP2Q8NFZ5 429 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 GSDMBQ8TAX9 411 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNF473Q8WTR7 871 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKRD49Q8WVL7 239 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 BIRC7Q96CA5 298 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 HDAC11Q96DB2 347 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 CFAP36Q96G28 342 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 KIRREL1Q96J84 757 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 VPS50Q96JG6 964 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 AIFM3Q96NN9 605 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 NAP1L4Q99733 375 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 FOXB1Q99853 325 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 SPZ1Q9BXG8 430 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC29A3Q9BZD2 475 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 VPS16Q9H269 839 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 INIPQ9NRY2 104 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 CTTNBP2NLQ9P2B4 639 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC12A4Q9UP95 1085 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TP53TG5Q9Y2B4 290 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TBC1D30Q9Y2I9 924 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 LRCH1Q9Y2L9 728 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 PCDHB6Q9Y5E3 794 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 NBEAL1Q6ZS30 2694 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 STK36Q9NRP7 1315 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 NIPBLQ6KC79 2804 aaeCLIP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 A0A0J9YVX5 310 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 A0A1B0GVG6 124 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 LINC00854A0A1B0GVQ3 168 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 PRSS44E7EML9 344 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 TRIM38O00635 465 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 GRID2O43424 1007 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 CHMP2AO43633 222 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 STBD1O95210 358 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 APOL3O95236 402 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 LARGE1O95461 756 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 FOSP01100 380 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 KRT18P05783 430 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 CLTAP09496 248 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 CKMT1AP12532 417 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 CD53P19397 219 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 MARCKSP29966 332 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 LTBQ06643 244 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 TFDP1Q14186 410 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 TRIM25Q14258 630 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 C15orf59Q2T9L4 293 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 FUT11Q495W5 492 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 MINDY4Q4G0A6 757 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ZC2HC1CQ53FD0 456 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 GKAP1Q5VSY0 366 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 PRAMEF9Q5VWM5 478 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 B3GNT9Q6UX72 402 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 LIPIQ6XZB0 460 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 RBM44Q6ZP01 1051 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 FAM124AQ86V42 546 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 CD302Q8IX05 232 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 TRIML2Q8N7C3 387 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ARL14EPQ8N8R7 260 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 MYCBPAPQ8TBZ2 947 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ZFPM2Q8WW38 1151 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ATL1Q8WXF7 558 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNF75CPQ92670 426 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 PRCCQ92733 491 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SIPA1Q96FS4 1042 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC39A13Q96H72 371 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 CEP19Q96LK0 163 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 LRGUKQ96M69 825 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 PSKH2Q96QS6 385 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC22A12Q96S37 553 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SGPP1Q9BX95 441 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 NSRP1Q9H0G5 558 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 GBA3Q9H227 469 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms