RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 RD3Q7Z3Z2 195 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 ZSWIM9Q86XI8 627 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 GKN2Q86XP6 184 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 CCDC13Q8IYE1 715 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 UBL4BQ8N7F7 174 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 NSMCE1Q8WV22 266 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 OLFM3Q96PB7 478 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 TSGA13Q96PP4 275 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 PSKH2Q96QS6 385 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 B3GNT4Q9C0J1 378 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 NOD2Q9HC29 1040 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 PCDHGC4Q9Y5F7 938 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 RP1L1Q8IWN7 2480 aaPredicted RBP17.92■□□□□ 0.46
VCP-202ENST00000417448 F5H423 210 aaPredicted RBP17.92■□□□□ 0.46
VCP-202ENST00000417448 MTSS1O43312 755 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 TM7SF2O76062 418 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 HLA-DQB2P05538 268 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 CCNB1P14635 433 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 TIMP2P16035 220 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 GLB1P16278 677 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 MX2P20592 715 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 DSC2Q02487 901 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 RAD51Q06609 339 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 PPIDQ08752 370 aaKnown RBP17.92■□□□□ 0.46
VCP-202ENST00000417448 RFTN1Q14699 578 aaPredicted RBP17.92■□□□□ 0.46
VCP-202ENST00000417448 PDK1Q15118 436 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 PTPRRQ15256 657 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 PPP2R5EQ16537 467 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 MEI1Q5TIA1 1274 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 BBS12Q6ZW61 710 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 MAML1Q92585 1016 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 HDAC11Q96DB2 347 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 SUV39H2Q9H5I1 410 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 RDH14Q9HBH5 336 aa17.92■□□□□ 0.46
VCP-202ENST00000417448 MIF4GDA9UHW6 222 aaKnown RBP17.91■□□□□ 0.46
VCP-202ENST00000417448 PNLIPP16233 465 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 UGT1A3P35503 534 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 ATP1A2P50993 1020 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 COPS2P61201 443 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 NIPAL4Q0D2K0 466 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 TMEM164Q5U3C3 297 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 OGFOD3Q6PK18 319 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 ENPP7Q6UWV6 458 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 TTC7BQ86TV6 843 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 TEX26Q8N6G2 289 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 IL22RA1Q8N6P7 574 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 CNTD1Q8N815 330 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 RCBTB1Q8NDN9 531 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 P3H4Q92791 437 aa17.91■□□□□ 0.46
VCP-202ENST00000417448 RBM15Q96T37 977 aaKnown RBP eCLIP17.91■□□□□ 0.46
VCP-202ENST00000417448 DOPEY1Q5JWR5 2465 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 A8MX80 341 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 H7C0C1 242 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 TOR1BO14657 336 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 NKX2-8O15522 239 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 DUX1O43812 170 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 RASGRP1O95267 797 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 FGF3P11487 239 aaPredicted RBP17.9■□□□□ 0.46
VCP-202ENST00000417448 ATP5OP48047 213 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 RENBPP51606 427 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 B4GALNT1Q00973 533 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 OTUD4Q01804 1114 aaKnown RBP17.9■□□□□ 0.46
VCP-202ENST00000417448 NSUN2Q08J23 767 aaKnown RBP eCLIP17.9■□□□□ 0.46
VCP-202ENST00000417448 RPS6KA1Q15418 735 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 MAP9Q49MG5 647 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 TIGD7Q6NT04 549 aaPredicted RBP17.9■□□□□ 0.46
VCP-202ENST00000417448 LRRC49Q8IUZ0 686 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 PAF1Q8N7H5 531 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 ACTL9Q8TC94 416 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 PDCD6IPQ8WUM4 868 aaKnown RBP17.9■□□□□ 0.46
VCP-202ENST00000417448 PDXPQ96GD0 296 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 ABHD17AQ96GS6 310 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 AGAP3Q96P47 875 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 SMIM14Q96QK8 99 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 NUDCD1Q96RS6 583 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 MGME1Q9BQP7 344 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 WRAP53Q9BUR4 548 aaKnown RBP17.9■□□□□ 0.46
VCP-202ENST00000417448 TLR10Q9BXR5 811 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 LRIT1Q9P2V4 623 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 R3HDM2Q9Y2K5 976 aaKnown RBP17.9■□□□□ 0.46
VCP-202ENST00000417448 COQ6Q9Y2Z9 468 aa17.9■□□□□ 0.46
VCP-202ENST00000417448 PPP1R12AO14974 1030 aaPredicted RBP17.89■□□□□ 0.45
VCP-202ENST00000417448 RNF224P0DH78 156 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 CXCR5P32302 372 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 UQCRFS1P47985 274 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 CSNK1DP48730 415 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 NR2C2P49116 596 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 SRP54P61011 504 aaKnown RBP17.89■□□□□ 0.45
VCP-202ENST00000417448 BCL2L1Q07817 233 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 TRAF2Q12933 501 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 HLTFQ14527 1009 aaKnown RBP eCLIP17.89■□□□□ 0.45
VCP-202ENST00000417448 NFATC4Q14934 902 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 PRKD1Q15139 912 aaPredicted RBP17.89■□□□□ 0.45
VCP-202ENST00000417448 C14orf28Q4W4Y0 310 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 BBS5Q8N3I7 341 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 C17orf53Q8N3J3 647 aaPredicted RBP17.89■□□□□ 0.45
VCP-202ENST00000417448 GPBAR1Q8TDU6 330 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 TFB1MQ8WVM0 346 aaKnown RBP17.89■□□□□ 0.45
VCP-202ENST00000417448 CATSPER2Q96P56 530 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 ALS2CR12Q96Q35 445 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms