RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 PKD2L2Q9NZM6 624 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 MTRF1LQ9UGC7 380 aaKnown RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 TCAF1Q9Y4C2 921 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 MAD1L1Q9Y6D9 718 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 HEATR9A2RTY3 570 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 PSMD11O00231 422 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 TNFSF14O43557 240 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 CD27P26842 260 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 MAGEA3P43357 314 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 CCT8P50990 548 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 STC1P52823 247 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 DRG2P55039 364 aaKnown RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 RPS21P63220 83 aaKnown RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 TUBB4BP68371 445 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 CUL1Q13616 776 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 SHBQ15464 509 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 TAF1AQ15573 450 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 ERCC6LQ2NKX8 1250 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 HP1BP3Q5SSJ5 553 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 FNBP1LQ5T0N5 605 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 KIAA0895LQ68EN5 471 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 LIPIQ6XZB0 460 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 CENPUQ71F23 418 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 HSD11B1LQ7Z5J1 315 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 ANKMY2Q8IV38 441 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 NUS1Q96E22 293 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 FMO2Q99518 471 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 FAM129AQ9BZQ8 928 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 KDM4CQ9H3R0 1056 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 BPIFA1Q9NP55 256 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 SAYSD1Q9NPB0 183 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 ZDHHC18Q9NUE0 388 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 ZFR2Q9UPR6 939 aaKnown RBP13.57□□□□□ -0.24
CPNE1-209ENST00000415920 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
CPNE1-209ENST00000415920 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 C2orf81A6NN90 581 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 CCL22O00626 93 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 STX7O15400 261 aaKnown RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 PCDHGA12O60330 932 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 TM7SF2O76062 418 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 LPOP22079 712 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 ECHS1P30084 290 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 ETV3P41162 512 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 GRK6P43250 576 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 NPY2RP49146 381 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 ZNF140P52738 457 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 TMPRSS15P98073 1019 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 PTPRCAPQ14761 206 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 FASTKD3Q14CZ7 662 aaKnown RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 TEAD4Q15561 434 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 TRIM69Q86WT6 500 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 ZBED8Q8IZ13 594 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 AGGF1Q8N302 714 aaeCLIP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 OR4K2Q8NGD2 314 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 OR13C4Q8NGS5 318 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 BRSK1Q8TDC3 778 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 STAMBPL1Q96FJ0 436 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 CFAP36Q96G28 342 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 DNAJC1Q96KC8 554 aaKnown RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 RANBP9Q96S59 729 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 TRIM56Q9BRZ2 755 aaKnown RBP13.56□□□□□ -0.24
CPNE1-209ENST00000415920 FZD3Q9NPG1 666 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 DKK4Q9UBT3 224 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 KCTD3Q9Y597 815 aa13.56□□□□□ -0.24
CPNE1-209ENST00000415920 ASXL3Q9C0F0 2248 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 GCN1Q92616 2671 aaKnown RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 A0A1B0GTQ1 180 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 C10orf142B7Z368 130 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 LDB2O43679 373 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 ZIC2O95409 532 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 PCCBP05166 539 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 ADRA1DP25100 572 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 HMGCLP35914 325 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 PDE1BQ01064 536 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 MSLNQ13421 630 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 SUZ12Q15022 739 aaKnown RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 CDKN3Q16667 212 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 TMEM259Q4ZIN3 620 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 SETMARQ53H47 684 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 TSTD2Q5T7W7 516 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 CES3Q6UWW8 571 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 CAPN12Q6ZSI9 719 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms