RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 OR2T34Q8NGX1 318 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 OR2T3Q8NH03 318 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 VCPIP1Q96JH7 1222 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 B3GNT5Q9BYG0 378 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ELOVL4Q9GZR5 314 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 MRPL39Q9NYK5 338 aaKnown RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 GRIP1Q9Y3R0 1128 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 TCRBV3S1A0A5B6 114 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PLK4O00444 970 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 NEMP1O14524 444 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ENPP3O14638 875 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PLIN3O60664 434 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 IQCF3P0C7M6 154 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 AXLP30530 894 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PTPN9P43378 593 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ADIGQ0VDE8 80 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PTPN20Q4JDL3 420 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PPP1R26Q5T8A7 1209 aaPredicted RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 XKRXQ6PP77 449 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 LYSMD2Q8IV50 215 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
SIK3-203ENST00000415541 MFSD4AQ8N468 514 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 FAM71DQ8N9W8 422 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 JOSD2Q8TAC2 188 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 MARVELD3Q96A59 401 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ZNF778Q96MU6 729 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 DEFB118Q96PH6 123 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 TWNKQ96RR1 684 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CPXM1Q96SM3 734 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 IL12RB2Q99665 862 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 SEPT5Q99719 369 aaPredicted RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 APOL4Q9BPW4 351 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 DGCR6LQ9BY27 220 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 LRRC40Q9H9A6 602 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 SPAG4Q9NPE6 437 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 DDIT4Q9NX09 232 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 VTI1BQ9UEU0 232 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 NUDT5Q9UKK9 219 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PADI3Q9ULW8 664 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.81□□□□□ -1.16
SIK3-203ENST00000415541 USP18Q9UMW8 372 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 BTBD3Q9Y2F9 522 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 COL1A2P08123 1366 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 C9IYK1 514 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 H0YAE9 185 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 SRP72O76094 671 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 MED26O95402 600 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PIGRP01833 764 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 CCND3P30281 292 aaPredicted RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 DDOSTP39656 456 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 BCAT1P54687 386 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 ROR1Q01973 937 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GEN1Q17RS7 908 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 C10orf107Q8IVU9 208 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 FAM156AQ8NDB6 213 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 MCFD2Q8NI22 146 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 ACTL9Q8TC94 416 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 NXNL1Q96CM4 212 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 FBXL20Q96IG2 436 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 RIPOR3Q96MK2 946 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 REXO4Q9GZR2 422 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 MOCS1Q9NZB8 636 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 KLHL8Q9P2G9 620 aaPredicted RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 DNMT3BQ9UBC3 853 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PCDHB7Q9Y5E2 793 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 TEX264Q9Y6I9 313 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 KAT6AQ92794 2004 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PNMA8CA0A1B0GUJ8 204 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 MYADML2A6NDP7 307 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 OR5K3A6NET4 321 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 STX16-NPEPL1H3BU86 382 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 HDAC3O15379 428 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 NDUFS2O75306 463 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 RASAL1O95294 804 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 F2P00734 622 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 APRTP07741 180 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 MIPP30301 263 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PTPN7P35236 360 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 BRCC3P46736 316 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 RPS9P46781 194 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 YAP1P46937 504 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 TKTL1P51854 596 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GNA13Q14344 377 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PLA2G4EQ3MJ16 856 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 SLC9B1Q4ZJI4 515 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 CES4AQ5XG92 561 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 BEND7Q8N7W2 519 aaPredicted RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 GALNT11Q8NCW6 608 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 CMASQ8NFW8 434 aaPredicted RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 SLC35B2Q8TB61 432 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 NDRG1Q92597 394 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 TSNARE1Q96NA8 513 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 CNPY3Q9BT09 278 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 NARFLQ9H6Q4 476 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 RAB6BQ9NRW1 208 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms