RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 KPNA6O60684 536 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 B3GAT3O94766 335 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 FUCA1P04066 466 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 ATXN1LP0C7T5 689 aaKnown RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 MTHFD2P13995 350 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 GFAPP14136 432 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 ZNF37AP17032 561 aaPredicted RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 HLA-DPA1P20036 260 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 CAPN3P20807 821 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 GRIK1P39086 918 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 PBX3P40426 434 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 ARSDP51689 593 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 MLLT10P55197 1068 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 EEFSECP57772 596 aaKnown RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 TIAL1Q01085 375 aaKnown RBP eCLIP9.75□□□□□ -0.85
CD44-206ENST00000415148 DSC2Q02487 901 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 IL10RBQ08334 325 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 GRB7Q14451 532 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 RAB39AQ14964 217 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 RPS6KA2Q15349 733 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 TGFBIQ15582 683 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 PIK3R6Q5UE93 754 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 NANOGP8Q6NSW7 305 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 ZNF549Q6P9A3 640 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 CD300LGQ6UXG3 332 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 PATL1Q86TB9 770 aaKnown RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 TBC1D21Q8IYX1 336 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 ADGRG5Q8IZF4 528 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 LEMD2Q8NC56 503 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 OR52K2Q8NGK3 314 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 OR10T2Q8NGX3 314 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 STAG3L4Q8TBR4 150 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 TBC1D15Q8TC07 691 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 CYGBQ8WWM9 190 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 RSPH1Q8WYR4 309 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 SGCDQ92629 289 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 LPPQ93052 612 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 HMCESQ96FZ2 354 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 NUSAP1Q9BXS6 441 aaKnown RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 HIPK3Q9H422 1215 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 CXorf21Q9HAI6 301 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 SP110Q9HB58 689 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 INTS10Q9NVR2 710 aaKnown RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 MARCH4Q9P2E8 410 aaPredicted RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 OAZ3Q9UMX2 235 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 CORINQ9Y5Q5 1042 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 GPR45Q9Y5Y3 372 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 NLRC5Q86WI3 1866 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 PTPRDP23468 1912 aa9.75□□□□□ -0.85
CD44-206ENST00000415148 TRIP12Q14669 1992 aaPredicted RBP9.75□□□□□ -0.85
CD44-206ENST00000415148 RNF103-CHMP3A0A140T963 221 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 MOXD2PA6NHM9 499 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 J3KR12 359 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 ARPC2O15144 300 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 RPP40O75818 363 aaKnown RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 FGF1P05230 155 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PRR35P0CG20 571 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 HGFP14210 728 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 NCK1P16333 377 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PURAQ00577 322 aaKnown RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 LCP2Q13094 533 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PLCL1Q15111 1095 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PYCR3Q53H96 274 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 FBXO48Q5FWF7 155 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TBPL2Q6SJ96 375 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 ABRAXAS1Q6UWZ7 409 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PRR23BQ6ZRT6 265 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PIM3Q86V86 326 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PROSER1Q86XN7 944 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PNPT1Q8TCS8 783 aaKnown RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 BRSK1Q8TDC3 778 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 KIAA1191Q96A73 305 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TMEM125Q96AQ2 219 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TUBGCP3Q96CW5 907 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 SUSD3Q96L08 255 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 ZNF599Q96NL3 588 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 KCNA7Q96RP8 456 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 DOK1Q99704 481 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 AARSD1Q9BTE6 412 aaKnown RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 C1QTNF3Q9BXJ4 246 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 DERL2Q9GZP9 239 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TUBB1Q9H4B7 451 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TBCCD1Q9NVR7 557 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 UXTQ9UBK9 157 aaPredicted RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 POLG2Q9UHN1 485 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 SCML2Q9UQR0 700 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 CRYL1Q9Y2S2 319 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PCDHGA4Q9Y5G9 962 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 V9GYQ6 96 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 A0A1W2PQH9 124 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 AXIN1O15169 862 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 KERAO60938 352 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 EEDO75530 441 aaKnown RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 MOCS2O96007 188 aaPredicted RBP9.74□□□□□ -0.85
CD44-206ENST00000415148 INHBBP09529 407 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 BRCC3P46736 316 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 KCNK10P57789 538 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms