RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ARHGAP8P85298 464 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 CALCOCO2Q13137 446 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 EIF2B5Q13144 721 aaKnown RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 NFATC2Q13469 925 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 HLA-BQ31612 363 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 ATP13A5Q4VNC0 1218 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 TPRG1LQ5T0D9 272 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 KIAA0930Q6ICG6 404 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 TCEAL6Q6IPX3 200 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 LAYNQ6UX15 382 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 SNX20Q7Z614 316 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 PHYKPLQ8IUZ5 450 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 CCNJLQ8IV13 435 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 PDIK1LQ8N165 341 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 DCLK2Q8N568 766 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 OR56A4Q8NGH8 313 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 OR13C4Q8NGS5 318 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 TCEAL3Q969E4 200 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 GLYATL1Q969I3 302 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 ULK4Q96C45 1275 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 SIGLEC10Q96LC7 697 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 LGR4Q9BXB1 951 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 SYBUQ9NX95 663 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 OR1A2Q9Y585 309 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 IGLV3-16A0A075B6K0 115 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 H3BM21 787 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 VEGFDO43915 354 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 USP1O94782 785 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TTC4O95801 387 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 SLC4A1P02730 911 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 ITGALP20701 1170 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 MGAT1P26572 445 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 FOXN2P32314 431 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 SESN2P58004 480 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 HNRNPKP61978 463 aaKnown RBP eCLIP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TUBB4BP68371 445 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 FRG1Q14331 258 aaKnown RBP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 SF3A2Q15428 464 aaKnown RBP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 SHBQ15464 509 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 HIF1AQ16665 826 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 DNAJC21Q5F1R6 531 aaKnown RBP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 LDLRAP1Q5SW96 308 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 AFTPHQ6ULP2 937 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 KANSL1Q7Z3B3 1105 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 MPP5Q8N3R9 675 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 MINDY1Q8N5J2 469 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 ZNF398Q8TD17 642 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 NETO1Q8TDF5 533 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 HEXDCQ8WVB3 486 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 ART4Q93070 314 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 HINFPQ9BQA5 517 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 LRRC1Q9BTT6 524 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 SMOC1Q9H4F8 434 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 GAREM1Q9H706 876 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TRIM39Q9HCM9 518 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 BPIFA1Q9NP55 256 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TMEM9BQ9NQ34 198 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 PIH1D1Q9NWS0 290 aaKnown RBP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TRNAU1APQ9NX07 287 aaKnown RBP11.82□□□□□ -0.52
ATG4B-207ENST00000415107 FKBPLQ9UIM3 349 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TMPRSS11EQ9UL52 423 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 KCTD3Q9Y597 815 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 CSNK1G3Q9Y6M4 447 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 TMEM131Q92545 1883 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 DNAH14Q0VDD8 3507 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 PLXNB3Q9ULL4 1909 aa11.82□□□□□ -0.52
ATG4B-207ENST00000415107 BPTFQ12830 3046 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 COL5A1P20908 1838 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 LAMA1P25391 3075 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 PRSS38A1L453 326 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 TMEM202A6NGA9 273 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CHUKO15111 745 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 NUAK1O60285 661 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 AVILO75366 819 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 RASGRP1O95267 797 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CEACAM5P06731 702 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 MC4RP32245 332 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ARSDP51689 593 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 HK3P52790 923 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ATXN3P54252 364 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ARL4CP56559 192 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 PPARDQ03181 441 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CACNG1Q06432 222 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 SEPT6Q14141 434 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ITIH4Q14624 930 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 PTPRCAPQ14761 206 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CHRNA6Q15825 494 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CCDC6Q16204 474 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ALG11Q2TAA5 492 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 AASDHQ4L235 1098 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CCDC38Q502W7 563 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 ALS2CLQ60I27 953 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 FAM151BQ6UXP7 276 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 CERS6Q6ZMG9 384 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 LMNTD2Q8IXW0 634 aa11.81□□□□□ -0.52
ATG4B-207ENST00000415107 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms