RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	ECHS1	P30084	290 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	MPL	P40238	635 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	DPP6	P42658	865 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	CSNK1E	P49674	416 aa	Known RBP	10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	AFF3	P51826	1226 aa	Known RBP	10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	STAT4	Q14765	748 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	CHRNA6	Q15825	494 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	CCDC6	Q16204	474 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	HIF1A	Q16665	826 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	ALS2CL	Q60I27	953 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	ADAMTSL4	Q6UY14	1074 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658		Q6ZSR6	202 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	TRAM1L1	Q8N609	369 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	PEX13	Q92968	403 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	COX14	Q96I36	57 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	TRIM56	Q9BRZ2	755 aa	Known RBP	10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	APOO	Q9BUR5	198 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	LGR4	Q9BXB1	951 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	TEX101	Q9BY14	249 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	EPB41L5	Q9HCM4	733 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	GDF3	Q9NR23	364 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	AASDHPPT	Q9NRN7	309 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	RAD18	Q9NS91	495 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	FKBPL	Q9UIM3	349 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	OR1A2	Q9Y585	309 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	TEX264	Q9Y6I9	313 aa		10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	EP300	Q09472	2414 aa	Predicted RBP	10.22	□□□□□ -0.77
ZNF3-205	ENST00000413658	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.21	□□□□□ -0.77
ZNF3-205	ENST00000413658	RIF1	Q5UIP0	2472 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM237B	A0A1B0GVD1	139 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	AGAP14	A8MT82	685 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	PRR5-ARHGAP8	B1AHC4	643 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TLR4	O00206	839 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TOR1B	O14657	336 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	NDC80	O14777	642 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPR39	O43194	453 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CTIF	O43310	598 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	HOXC4	P09017	264 aa	Predicted RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	GNS	P15586	552 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TSHR	P16473	764 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TGM1	P22735	817 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	ARNT	P27540	789 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPAM1	P38567	509 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	PLTP	P55058	493 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	YPEL5	P62699	121 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TMPRSS15	P98073	1019 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CAV1	Q03135	178 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	DHX9	Q08211	1270 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	OVGP1	Q12889	678 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CALCOCO2	Q13137	446 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	LAMB3	Q13751	1172 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	FASTKD3	Q14CZ7	662 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	DUOXA1	Q1HG43	343 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	SKIDA1	Q1XH10	827 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	ATP13A5	Q4VNC0	1218 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZDHHC20	Q5W0Z9	365 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	RAET1G	Q6H3X3	334 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	SLC23A3	Q6PIS1	610 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CES3	Q6UWW8	571 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM151B	Q6UXP7	276 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	NLRP9	Q7RTR0	991 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TMEM135	Q86UB9	458 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	HEATR4	Q86WZ0	1026 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPATS2	Q86XZ4	545 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	PPHLN1	Q8NEY8	458 aa	Known RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CEP76	Q8TAP6	659 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM174A	Q8TBP5	190 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	MFSD3	Q96ES6	412 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CDKN2AIPNL	Q96HQ2	116 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	TBATA	Q96M53	351 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	FCRL3	Q96P31	734 aa	Predicted RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZSCAN5A	Q9BUG6	496 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	SMOC1	Q9H4F8	434 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	SUSD2	Q9UGT4	822 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	CFAP54	Q96N23	3096 aa		10.21	□□□□□ -0.78
ZNF3-205	ENST00000413658	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	TRBV5-4	A0A0C4DH59	114 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	GLYATL1P3	A0A0U1RQE8	302 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZCWPW2	A0A1B0GU75	182 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658		A0A1B0GVT2	93 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	MAGEB16	A2A368	324 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	CCDC162P	A2VCL2	907 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ANKRD33B	A6NCL7	494 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A9	O60656	530 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	SRP72	O76094	671 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	SLU7	O95391	586 aa	Known RBP	10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	RHOXF2B	P0C7M4	288 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF806	P0C7X5	589 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	THEGL	P0DJG4	465 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A6	P19224	532 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A1	P22309	533 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A4	P22310	534 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A3	P35503	534 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	UGT1A5	P35504	534 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	HADHA	P40939	763 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	CTSK	P43235	329 aa		10.2	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPR1	P46091	355 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms