RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TOX3O15405 576 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 DDX3YO15523 660 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 FFAR2O15552 330 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 KCNN4O15554 427 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 RRP8O43159 456 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 PMPCBO75439 489 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 MAP3K6O95382 1288 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ASMTLO95671 621 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 MT-CYBP00156 380 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 RALBP11234 206 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 PECAM1P16284 738 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 XRCC1P18887 633 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 NFKB1P19838 968 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 PSMA3P25788 255 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 CCKBRP32239 447 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 CD68P34810 354 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 ADCY8P40145 1251 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 EPHA4P54764 986 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SARNPP82979 210 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 TMEM115Q12893 351 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 TARDBPQ13148 414 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP54-202ENST00000413442 DNAJC3Q13217 504 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 BIRC2Q13490 618 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 GTF2H3Q13889 308 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SPIDRQ14159 915 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 HLTFQ14527 1009 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP54-202ENST00000413442 IHHQ14623 411 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SKIDA1Q1XH10 827 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ISXQ2M1V0 245 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 DEFB133Q30KQ1 61 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ZNF542PQ5EBM4 170 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 LRRC73Q5JTD7 316 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ZNF569Q5MCW4 686 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 CERCAMQ5T4B2 595 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 HES3Q5TGS1 186 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 LYPLAL1Q5VWZ2 237 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 DENND2CQ68D51 928 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 CYB5D1Q6P9G0 228 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ZNF449Q6P9G9 518 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ABRAXAS1Q6UWZ7 409 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 NPNTQ6UXI9 565 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 EFL1Q7Z2Z2 1120 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 ZNF438Q7Z4V0 828 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SLC9B2Q86UD5 537 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 TSPAN33Q86UF1 283 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 PIM3Q86V86 326 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 PROSER1Q86XN7 944 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 CPNE8Q86YQ8 564 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SLC35F3Q8IY50 421 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ARL14Q8N4G2 192 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ACRBPQ8NEB7 543 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 WDR36Q8NI36 951 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 OR1E3Q8WZA6 343 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ALG3Q92685 438 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 FGF11Q92914 225 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 GLYATL1Q969I3 302 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 ULK4Q96C45 1275 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 LIN37Q96GY3 246 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 SGSM3Q96HU1 749 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 PBKQ96KB5 322 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 MRGPRX2Q96LB1 330 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 OR2M4Q96R27 311 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 GFM1Q96RP9 751 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 TIMM29Q9BSF4 260 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 LGR4Q9BXB1 951 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SPATA16Q9BXB7 569 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 DPH1Q9BZG8 443 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 TMEM168Q9H0V1 697 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 LRRC40Q9H9A6 602 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 POLR1BQ9H9Y6 1135 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 CARS2Q9HA77 564 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 GRPEL1Q9HAV7 217 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 FGF22Q9HCT0 170 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SARS2Q9NP81 518 aaKnown RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 SMOXQ9NWM0 555 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 LRIT1Q9P2V4 623 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 SAE1Q9UBE0 346 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 ZNHIT2Q9UHR6 403 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 MOSPD1Q9UJG1 213 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 TTC7AQ9ULT0 858 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 SUFUQ9UMX1 484 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 GUCA1BQ9UMX6 200 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 HYOU1Q9Y4L1 999 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 A0A087WV48 116 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 CCDC187A0A096LP49 1063 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 LY6G6EA0A0G2JKS1 128 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 MAGEB16A2A368 324 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 GOLGA8CPA6NN73 597 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 RHPN2P1A8MT19 583 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 CFAP99D6REC4 459 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 HGSO14964 777 aaPredicted RBP6.33□□□□□ -1.4
USP54-202ENST00000413442 GRID2O43424 1007 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 DNAJC6O75061 913 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 CDK14O94921 469 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 CPNE6O95741 557 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 SOD1P00441 154 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 PRKCGP05129 697 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 BPIP17213 487 aa6.33□□□□□ -1.4
USP54-202ENST00000413442 IDSP22304 550 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms