RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 ERGIC3Q9Y282 383 aa13.8□□□□□ -0.2
COPS7B-210ENST00000413197 MRPL42Q9Y6G3 142 aaKnown RBP13.8□□□□□ -0.2
COPS7B-210ENST00000413197 TCRBV5S2A0A599 114 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 NR5A2O00482 541 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 MT-CYBP00156 380 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 AKR1A1P14550 325 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 MATN1P21941 496 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 POLR2IP36954 125 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 HALP42357 657 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 RPS9P46781 194 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 YBX1P67809 324 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 FOXM1Q08050 763 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 CCSAPQ6IQ19 270 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 CLEC20AQ6ZU45 233 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 DDIASQ8IXT1 998 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 SLC15A4Q8N697 577 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 PDPRQ8NCN5 879 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 PHF21BQ96EK2 531 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 TRIP12Q14669 1992 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 CLDN5O00501 218 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 XPOTO43592 962 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 SEC14L2O76054 403 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 HOXD8P13378 290 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 PAMP19021 973 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 FUT4P22083 530 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 ADRA1AP35348 466 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 NEDD8Q15843 81 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 FSCN1Q16658 493 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 VPS26BQ4G0F5 336 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 ZNF773Q6PK81 442 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 CXCL17Q6UXB2 119 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 OSTM1Q86WC4 334 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 ZC3H7AQ8IWR0 971 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 ZNF419Q96HQ0 510 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 C1orf50Q9BV19 199 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 MUC13Q9H3R2 512 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 IL1RL2Q9HB29 575 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 INTS10Q9NVR2 710 aaKnown RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 PKD2L2Q9NZM6 624 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 IFT80Q9P2H3 777 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-210ENST00000413197 PCDHA9Q9Y5H5 950 aa13.79□□□□□ -0.2
COPS7B-210ENST00000413197 SHROOM3Q8TF72 1996 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 COL1A2P08123 1366 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CCDC163A0A0D9SF12 145 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 A6NJY4 79 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 J3QRK9 145 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 SEPT4O43236 478 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ANXA9O76027 345 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 LRIG2O94898 1065 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 MATN4O95460 622 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CDH3P22223 829 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 TRAF2Q12933 501 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ATP1A4Q13733 1029 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 NR1D2Q14995 579 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 RGS21Q2M5E4 152 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 KIF19Q2TAC6 998 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ZNF678Q5SXM1 525 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 MARCH8Q5T0T0 291 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 NEPROQ6NW34 567 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 PTRH1Q86Y79 214 aaKnown RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 PHYKPLQ8IUZ5 450 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CLYBLQ8N0X4 340 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 IPMKQ8NFU5 416 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 FBXL8Q96CD0 374 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 LRRC58Q96CX6 371 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ZNF560Q96MR9 790 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CYP2S1Q96SQ9 504 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 FICDQ9BVA6 458 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 GPN2Q9H9Y4 310 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 SLC52A3Q9NQ40 469 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ITGB1BP2Q9UKP3 347 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 VWA7Q9Y334 891 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CFAP99D6REC4 459 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 H0YAE9 185 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ANGPT2O15123 496 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CD4P01730 458 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 MAP4P27816 1152 aaKnown RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 DAOAP59103 153 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 NFKB2Q00653 900 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 MRPL28Q13084 256 aaKnown RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 TUBA3CQ13748 450 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CYP51A1Q16850 503 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
COPS7B-210ENST00000413197 CHST15Q7LFX5 561 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms