RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 OAS1P00973 400 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 ESR1P03372 595 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 NCF1P14598 390 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 SLC2A4P14672 509 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 MAPK1P28482 360 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 VIPR1P32241 457 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CLCN4P51793 760 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 C21orf59P57076 290 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 ELAVL3Q14576 367 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 KCNJ11Q14654 390 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 LDLRAP1Q5SW96 308 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 TMEM25Q86YD3 366 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 RAVER1Q8IY67 606 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 OR56A4Q8NGH8 313 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 RDH11Q8TC12 318 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CXorf40BQ96DE9 158 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 MFSD3Q96ES6 412 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 DNAJC1Q96KC8 554 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 PRPF18Q99633 342 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 IL12RB2Q99665 862 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CCT7Q99832 543 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CYP4F12Q9HCS2 524 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CASS4Q9NQ75 786 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 INTS10Q9NVR2 710 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 PLXNA1Q9UIW2 1896 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 SESN1Q9Y6P5 492 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 FPGTO14772 594 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 NQO1P15559 274 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 TJAP1Q5JTD0 557 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 SLC41A1Q8IVJ1 513 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 MRPL57Q9BQC6 102 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 WRAP53Q9BUR4 548 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 ATPIF1Q9UII2 106 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF229Q9UJW7 825 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 GPSM3Q9Y4H4 160 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 PARP14Q460N5 1801 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 TCEA3O75764 348 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 APOA1P02647 267 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 IRS1P35568 1242 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 NSG1P42857 185 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CCNG1P51959 295 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 PTPN5P54829 565 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 ESRP1Q6NXG1 681 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 PEX13Q92968 403 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 NT5C3BQ969T7 300 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 TCEAL4Q96EI5 215 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 IMP4Q96G21 291 aaKnown RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 MAGEB10Q96LZ2 347 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 OLFM1Q99784 485 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 THAP1Q9NVV9 213 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-211ENST00000413186 SPACA6W5XKT8 324 aa8.49□□□□□ -1.05
SYNE1-211ENST00000413186 INPP4BO15327 924 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 MAFKO60675 156 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 ATP5F1P24539 256 aaPredicted RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 RPL34P49207 117 aaKnown RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 TEAD4Q15561 434 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 SNX20Q7Z614 316 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 TAF8Q7Z7C8 310 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 PCYOX1LQ8NBM8 494 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 CCDC124Q96CT7 223 aaKnown RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 REPS1Q96D71 796 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 MMADHCQ9H3L0 296 aaPredicted RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 ELOVL6Q9H5J4 265 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 OPTCQ9UBM4 332 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 LGALS13Q9UHV8 139 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 PIAS3Q9Y6X2 628 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 PRRC2BQ5JSZ5 2229 aaKnown RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 MYO7AQ13402 2215 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF236Q9UL36 1845 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 GSTA4O15217 222 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 PAPSS2O95340 614 aaPredicted RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 VAV1P15498 845 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 DRD1P21728 446 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 CHRNA4P43681 627 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 SIRPB2Q5JXA9 342 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF852Q6ZMS4 543 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 LONP2Q86WA8 852 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 HMGB4Q8WW32 186 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 PPWD1Q96BP3 646 aaKnown RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 ZSCAN5AQ9BUG6 496 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 BTBD1Q9H0C5 482 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 USP29Q9HBJ7 922 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 AHSPQ9NZD4 102 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 MARCOQ9UEW3 520 aaPredicted RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 FKBPLQ9UIM3 349 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 ITM2BQ9Y287 266 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 SLC27A6Q9Y2P4 619 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 CCNT2O60583 730 aaKnown RBP8.48□□□□□ -1.05
SYNE1-211ENST00000413186 TFEBP19484 476 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 DGKEP52429 567 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 HK2P52789 917 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 CYP2A13Q16696 494 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 SEL1L3Q68CR1 1132 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 RNF43Q68DV7 783 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 CYB5D1Q6P9G0 228 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 GAREM2Q75VX8 874 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 DET1Q7L5Y6 550 aa8.48□□□□□ -1.05
SYNE1-211ENST00000413186 BCL7CQ8WUZ0 217 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms