RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ZNF404Q494X3 552 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 SLC36A3Q495N2 470 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 RABL3Q5HYI8 236 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 OTOP3Q7RTS5 596 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 TXNDC5Q8NBS9 432 aaKnown RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 TIMM22Q9Y584 194 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 AHSGP02765 367 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 FKBP1AP62942 108 aaKnown RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 PIGFQ07326 219 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 HSF5Q4G112 596 aaPredicted RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 SCN4BQ8IWT1 228 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 TMEM132CQ8N3T6 1108 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 PIK3R3Q92569 461 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 TMCO6Q96DC7 493 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 ZNF486Q96H40 463 aaPredicted RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 ALPK1Q96QP1 1244 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 ANKHQ9HCJ1 492 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 CCDC177Q9NQR7 707 aaPredicted RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 DIABLOQ9NR28 239 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 PIN4Q9Y237 131 aaKnown RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 ANKRD36CQ5JPF3 1778 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 CENPBD1B2RD01 187 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 VPS72Q15906 364 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 CRY1Q16526 586 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 CCDC142Q17RM4 750 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 SMU1Q2TAY7 513 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 SLC15A3Q8IY34 581 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 TCAIMQ8N3R3 496 aa13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 MRPL45Q9BRJ2 306 aaKnown RBP13.84□□□□□ -0.19
CLTCL1-201ENST00000412649 LRP5O75197 1615 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 VTNP04004 478 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 CYBBP04839 570 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 SLC1A2P43004 574 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 TPRG1LQ5T0D9 272 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 CCDC117Q8IWD4 279 aaPredicted RBP13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 LZTR1Q8N653 840 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 MYRFLQ96LU7 910 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 VRTNQ9H8Y1 702 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 SP140LQ9H930 580 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 WWOXQ9NZC7 414 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 FAM50BQ9Y247 325 aa13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 SAMHD1Q9Y3Z3 626 aaKnown RBP13.83□□□□□ -0.19
CLTCL1-201ENST00000412649 IMPDH1P20839 514 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 NR4A2P43354 598 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 RGS4P49798 205 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 ATP4BP51164 291 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 SPATS1Q496A3 300 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 NHSL2Q5HYW2 709 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 GPRIN3Q6ZVF9 776 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 REXO5Q96IC2 774 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 SPON2Q9BUD6 331 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TDRD1Q9BXT4 1180 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 NRP1O14786 923 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 NUAK1O60285 661 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 ADRA1BP35368 520 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 OLR1P78380 273 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 CACNB2Q08289 660 aaPredicted RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 LCN8Q6JVE9 175 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 CGREF1Q99674 301 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM245Q9H330 911 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 LATS2Q9NRM7 1088 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 KLK14Q9P0G3 267 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 AFF4Q9UHB7 1163 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 CDH7Q9ULB5 785 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 HOXB6P17509 224 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 UBA1P22314 1058 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 POU1F1P28069 291 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TUBA1BP68363 451 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TAB1Q15750 504 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TAF12Q16514 161 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 ZRANB3Q5FWF4 1079 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TUBA1AQ71U36 451 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM9CQ8IZT9 166 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 KDM1BQ8NB78 822 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 MROQ9BYG7 248 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 ULBP1Q9BZM6 244 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 TCAF1Q9Y4C2 921 aa13.83□□□□□ -0.2
CLTCL1-201ENST00000412649 LOC100130705A0A1B0GUX0 176 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 TMCC2O75069 709 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ADAM23O75077 832 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 CHRNA1P02708 482 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 RENBPP51606 427 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 PPP5CP53041 499 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 MTPNP58546 118 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ELP6Q0PNE2 266 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 C1DQ13901 141 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 SYT16Q17RD7 645 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 MARC1Q5VT66 337 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ZCCHC8Q6NZY4 707 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 B3GNT9Q6UX72 402 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 DNERQ8NFT8 737 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms