RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 FUBP1Q96AE4 644 aaKnown RBP16.51■□□□□ 0.23
SUMO1-208ENST00000409627 SKA1Q96BD8 255 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 KLHDC7BQ96G42 594 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 COX14Q96I36 57 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 FCRL3Q96P31 734 aaPredicted RBP16.51■□□□□ 0.23
SUMO1-208ENST00000409627 TRIM56Q9BRZ2 755 aaKnown RBP16.51■□□□□ 0.23
SUMO1-208ENST00000409627 SUDS3Q9H7L9 328 aaPredicted RBP16.51■□□□□ 0.23
SUMO1-208ENST00000409627 PHPT1Q9NRX4 125 aaPredicted RBP16.51■□□□□ 0.23
SUMO1-208ENST00000409627 ZC3H7BQ9UGR2 993 aaKnown RBP16.51■□□□□ 0.23
SUMO1-208ENST00000409627 NFU1Q9UMS0 254 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 SLC30A1Q9Y6M5 507 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 LRP4O75096 1905 aa16.51■□□□□ 0.23
SUMO1-208ENST00000409627 PCDH15Q96QU1 1955 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 PROB1E7EW31 1015 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 CACNB4O00305 520 aaPredicted RBP16.5■□□□□ 0.23
SUMO1-208ENST00000409627 GOT2P00505 430 aaKnown RBP16.5■□□□□ 0.23
SUMO1-208ENST00000409627 THEGLP0DJG4 465 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 ARNTP27540 789 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 FOXN2P32314 431 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 CACNG1Q06432 222 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 CRYMQ14894 314 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 NFATC4Q14934 902 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 GPR33Q49SQ1 333 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 HP1BP3Q5SSJ5 553 aaPredicted RBP16.5■□□□□ 0.23
SUMO1-208ENST00000409627 STEAP4Q687X5 459 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 CCDC25Q86WR0 208 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 RELL1Q8IUW5 271 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 ANKMY2Q8IV38 441 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 GPR161Q8N6U8 529 aaKnown RBP16.5■□□□□ 0.23
SUMO1-208ENST00000409627 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
SUMO1-208ENST00000409627 PYROXD1Q8WU10 500 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 BTN2A2Q8WVV5 523 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 GLYATL1Q969I3 302 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 ULK4Q96C45 1275 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 HIC2Q96JB3 615 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 ARRDC1-AS1Q9H2J1 176 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 ASB8Q9H765 288 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 GMEB2Q9UKD1 530 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 CNOT6Q9ULM6 557 aaKnown RBP16.5■□□□□ 0.23
SUMO1-208ENST00000409627 OR1A2Q9Y585 309 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 MUC6Q6W4X9 2439 aa16.5■□□□□ 0.23
SUMO1-208ENST00000409627 PI4KAP42356 2102 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 TRBV5-4A0A0C4DH59 114 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 OR51F1A6NGY5 319 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 TLR4O00206 839 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 GPR39O43194 453 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 VAPBO95292 243 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 LMNAP02545 664 aaKnown RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 ARCN1P48444 511 aaKnown RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 CSNK1EP49674 416 aaKnown RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 THOP1P52888 689 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 NXPH1P58417 271 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 PTK2BQ14289 1009 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 FRG1Q14331 258 aaKnown RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 ERCC6LQ2NKX8 1250 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 ZRANB3Q5FWF4 1079 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 PLA2G2CQ5R387 149 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 RALGAPA1Q6GYQ0 2036 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 SLC23A3Q6PIS1 610 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 LAYNQ6UX15 382 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 MACC1Q6ZN28 852 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 UNC5AQ6ZN44 842 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 SLC22A18ASQ8N1D0 253 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 OR6P1Q8NGX9 317 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 OR4L1Q8NH43 312 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 LGR4Q9BXB1 951 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 PLAC1Q9HBJ0 212 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 TMPRSS11EQ9UL52 423 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 V9GYY5 206 aaPredicted RBP16.49■□□□□ 0.23
SUMO1-208ENST00000409627 GON4LQ3T8J9 2241 aa16.49■□□□□ 0.23
SUMO1-208ENST00000409627 TMEM131Q92545 1883 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 SDK1Q7Z5N4 2213 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 INPP4BO15327 924 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A9O60656 530 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 SLC25A14O95258 325 aaPredicted RBP16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A6P19224 532 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A1P22309 533 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A4P22310 534 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 KELP23276 732 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 HTR1BP28222 390 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A3P35503 534 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A5P35504 534 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 MAGEA4P43358 317 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 C21orf59P57076 290 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 LONRF1Q17RB8 773 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 FASTKD1Q53R41 847 aaKnown RBP16.48■□□□□ 0.23
SUMO1-208ENST00000409627 LDLRAP1Q5SW96 308 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 WDR93Q6P2C0 686 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 NXPE1Q8N323 547 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 DDHD1Q8NEL9 900 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.48■□□□□ 0.23
SUMO1-208ENST00000409627 CFAP36Q96G28 342 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A7Q9HAW7 530 aa16.48■□□□□ 0.23
SUMO1-208ENST00000409627 UGT1A10Q9HAW8 530 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms