RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NDUFS2O75306 463 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SEC24DO94855 1032 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 FGBP02675 491 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CHRNA1P02708 482 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 APRTP07741 180 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CKBP12277 381 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CD1EP15812 388 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PCMT1P22061 227 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 ATP5OP48047 213 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CLCNKBP51801 687 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PRKCDQ05655 676 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 IL18R1Q13478 541 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 STILQ15468 1287 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 FXNQ16595 210 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TYSND1Q2T9J0 566 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 XKRXQ6PP77 449 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TMEM270Q6UE05 265 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 HORMAD1Q86X24 394 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 UBQLNLQ8IYU4 475 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 Q8N9G6 341 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 KDM1BQ8NB78 822 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 FAM156AQ8NDB6 213 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TSPEARQ8WU66 669 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 HDAC10Q969S8 669 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PCYT2Q99447 389 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 RBBP8Q99708 897 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 B3GNT4Q9C0J1 378 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SLIRPQ9GZT3 109 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 DSN1Q9H410 356 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 ANKEF1Q9NU02 776 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 OAZ3Q9UMX2 235 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 STYXL1Q9Y6J8 313 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TTC28Q96AY4 2481 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CCDC78A2IDD5 438 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 PABPN1LA6NDY0 278 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 A8MU76 341 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 H0Y858 1186 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 DDX39AO00148 427 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 EI24O14681 340 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 MRASO14807 208 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 NBNO60934 754 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 PIGNO95427 931 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 LDLRP01130 860 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 AMHP03971 560 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 MYOGP15173 224 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ATP6V1B2P21281 511 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ENPP1P22413 925 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 MPSTP25325 297 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ETV6P41212 452 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 HTR3AP46098 478 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ALDH3A2P51648 485 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 RABGGTBP53611 331 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 DEFA1P59665 94 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 DEFA3P59666 94 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 DNAJB13P59910 316 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 MVKQ03426 396 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CLCQ05315 142 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ARL13AQ5H913 290 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 C6orf141Q5SZD1 244 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 LRRC8EQ6NSJ5 796 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 FAM122CQ6P4D5 195 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 LRRC8DQ7L1W4 858 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CATSPER4Q7RTX7 472 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 TMCO2Q7Z6W1 182 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ADCK1Q86TW2 530 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 SERINC5Q86VE9 423 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 C4orf19Q8IY42 314 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 SETD6Q8TBK2 473 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 FBLIM1Q8WUP2 373 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CDHR1Q96JP9 859 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 FAM84AQ96KN4 292 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CEP295NLQ96MC4 621 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 DEPDC7Q96QD5 511 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF300Q96RE9 604 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 BDH2Q9BUT1 245 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CHID1Q9BWS9 393 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 NXF2Q9GZY0 626 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 AGO4Q9HCK5 861 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 JPH1Q9HDC5 661 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 TLR9Q9NR96 1032 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 ASNSD1Q9NWL6 643 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 SEPT9Q9UHD8 586 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 OSGIN1Q9UJX0 560 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 YBX2Q9Y2T7 364 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 NDUFAF1Q9Y375 327 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 CAB39Q9Y376 341 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 SNX5Q9Y5X3 404 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 PMF1-BGLAPU3KQ54 211 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 MICAL3Q7RTP6 2002 aa10.59□□□□□ -0.71
NIF3L1-204ENST00000409357 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 ZBBXA8MT70 800 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 KCNN4O15554 427 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms