RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 IHHQ14623 411 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 C19orf48Q6RUI8 117 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 CRTC1Q6UUV9 634 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 C11orf96Q7Z7L8 435 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 TMPRSS12Q86WS5 348 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 SAMD14Q8IZD0 417 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 IFT81Q8WYA0 676 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 TSACCQ96A04 125 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 ECHDC3Q96DC8 303 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 PSKH2Q96QS6 385 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 CHP1Q99653 195 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 LRRC61Q9BV99 259 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 CLPBQ9H078 707 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 ATP13A3Q9H7F0 1226 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 TBCCD1Q9NVR7 557 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 IP6K2Q9UHH9 426 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 PCDHB1Q9Y5F3 818 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 LRRK1Q38SD2 2015 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 KNTC1P50748 2209 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 ATRXP46100 2492 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 GCN1Q92616 2671 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 AQP9O43315 295 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CKMT1AP12532 417 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CR2P20023 1033 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 XPAP23025 273 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 SERPINA4P29622 427 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 HNRNPH3P31942 346 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ARL4AP40617 200 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CSNK1DP48730 415 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CLK1P49759 484 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ADKP55263 362 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 HNRNPKP61978 463 aaKnown RBP eCLIP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 DAB2P98082 770 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 TRAF2Q12933 501 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 KRT81Q14533 505 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 INPP5AQ14642 412 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ACAP1Q15027 740 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 LRRC14Q15048 493 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CDKN3Q16667 212 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 MUM1Q2TAK8 710 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 PRRT3Q5FWE3 981 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CFAP58Q5T655 872 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 KAZNQ674X7 775 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 NCBP2-AS2Q69YL0 99 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 SPECC1LQ69YQ0 1117 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 WDR93Q6P2C0 686 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 GUSBP11Q6P575 273 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 BRAT1Q6PJG6 821 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 C6orf89Q6UWU4 347 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 C3orf62Q6ZUJ4 267 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 DCP2Q8IU60 420 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 VSTM4Q8IW00 320 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 PHACTR4Q8IZ21 702 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 RNF10Q8N5U6 811 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 PCDH19Q8TAB3 1148 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 NCSTNQ92542 709 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 IFT43Q96FT9 208 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF641Q96N77 438 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 DNAJC7Q99615 494 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CCT7Q99832 543 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 NLGN3Q9NZ94 848 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CTTNBP2NLQ9P2B4 639 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 APOBEC3BQ9UH17 382 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 GPSM3Q9Y4H4 160 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 DYTNA2CJ06 578 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 DPPA5A6NC42 116 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 NDUFB5O43674 189 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 RECQL5O94762 991 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 PROSCO94903 275 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 C1SP09871 688 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 TSHRP16473 764 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 THOP1P52888 689 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 GNGT1P63211 74 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ELP6Q0PNE2 266 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ZBTB17Q13105 803 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 SPIDRQ14159 915 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF235Q14590 738 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 RFTN1Q14699 578 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 SLC18A3Q16572 532 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ALG11Q2TAA5 492 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ERAP2Q6P179 960 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 MACC1Q6ZN28 852 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 EXOC3L1Q86VI1 746 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 SFTPA2Q8IWL1 248 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ATPAF2Q8N5M1 289 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CCDC110Q8TBZ0 833 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 HCAR2Q8TDS4 363 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 PDCD6IPQ8WUM4 868 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 STAMBPL1Q96FJ0 436 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 PDXPQ96GD0 296 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 TUBGCP5Q96RT8 1024 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 VCXQ9H320 206 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ANKZF1Q9H8Y5 726 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms