RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ITGB3BPQ13352 177 aaPredicted RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 CXorf57Q6NSI4 855 aaKnown RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 POMZP3Q6PJE2 187 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 PPTC7Q8NI37 304 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 ADAMTS15Q8TE58 950 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 EBNA1BP2Q99848 306 aaKnown RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 TMEM27Q9HBJ8 222 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 IFT46Q9NQC8 304 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 PHPT1Q9NRX4 125 aaPredicted RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 CNOT6Q9ULM6 557 aaKnown RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 TRAF6Q9Y4K3 522 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 ARF4P18085 180 aaPredicted RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 C5orf22Q49AR2 442 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 LPPQ93052 612 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 ACAT2Q9BWD1 397 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 PAGE1O75459 146 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 LCA5LO95447 670 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 HNRNPLP14866 589 aaKnown RBP eCLIP12□□□□□ -0.49
SMCR8-201ENST00000406438 PTPRAP18433 802 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 GABRB2P47870 512 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 C1GALT1C1Q96EU7 318 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 JSRP1Q96MG2 331 aaPredicted RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 C5orf34Q96MH7 638 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 MUC13Q9H3R2 512 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 PTPRJQ12913 1337 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 NUP205Q92621 2012 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 TSPAN9O75954 239 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 VIPP01282 170 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 TARBP2Q15633 366 aaKnown RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
SMCR8-201ENST00000406438 AMIGO1Q86WK6 493 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 ATP6V1C2Q8NEY4 427 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 ADCY4Q8NFM4 1077 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 IKZF2Q9UKS7 526 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 PRKAB1Q9Y478 270 aa12□□□□□ -0.49
SMCR8-201ENST00000406438 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 SHBGP04278 402 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 EPHA3P29320 983 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 SMAD3P84022 425 aaKnown RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 FOLH1Q04609 750 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 ZBTB6Q15916 424 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TNFAIP8L3Q5GJ75 292 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 AKAP14Q86UN6 197 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 ZNF483Q8TF39 744 aaPredicted RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 BTN2A3PQ96KV6 586 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 RTKNQ9BST9 563 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 H3BM21 787 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 DCLK1O15075 740 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 AP5Z1O43299 807 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 NT5EP21589 574 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 MRPS5P82675 430 aaKnown RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 LAPTM5Q13571 262 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 C9orf57Q5W0N0 161 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 MTMR9Q96QG7 549 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TTPALQ9BTX7 342 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 NXF3Q9H4D5 531 aaKnown RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 RNF19AQ9NV58 838 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 KCTD5Q9NXV2 234 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 COL1A2P08123 1366 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 ERVK-21P61565 698 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 DUSP4Q13115 394 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 ISLR2Q6UXK2 745 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TBC1D10AQ9BXI6 508 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 COMMD4Q9H0A8 199 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 LRMDAQ9H2I8 198 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 A0A0J9YYE9 177 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TRIM64A6NGJ6 449 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 PRMT5O14744 637 aaPredicted RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TP73O15350 636 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 C1RP00736 705 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 LAMP2P13473 410 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 SNAPC1Q16533 368 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 PARP8Q8N3A8 854 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TRMOQ9BU70 441 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 CHMP1AQ9HD42 196 aaPredicted RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 RAB21Q9UL25 225 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 C5orf60A6NFR6 353 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 GABRR2P28476 465 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 CERCAMQ5T4B2 595 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 THOC7Q6I9Y2 204 aaKnown RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 AADACL2Q6P093 401 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 GPR142Q7Z601 462 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 CFAP206Q8IYR0 622 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 SPATA6LQ8N4H0 392 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 KCTD4Q8WVF5 259 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 C11orf24Q96F05 449 aaPredicted RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TCF12Q99081 682 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 TLE6Q9H808 572 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 STOML2Q9UJZ1 356 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 SAGE2PA6NJ88 616 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 APOC1P02654 83 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 ELP6Q0PNE2 266 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 PIGZQ86VD9 579 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 NRSN1Q8IZ57 195 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 OR4C6Q8NH72 309 aa11.99□□□□□ -0.49
SMCR8-201ENST00000406438 AGO3Q9H9G7 860 aaKnown RBP11.99□□□□□ -0.49
SMCR8-201ENST00000406438 LRTM1Q9HBL6 345 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms