RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MAST1Q9Y2H9 1570 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 SPAG9O60271 1321 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 SYCP2Q9BX26 1530 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 FAM135AQ9P2D6 1515 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 GPR75-ASB3A0A0A6YYF3 556 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 A0A1B0GVM2 712 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 H3BQ06 376 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 VCYO14598 125 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 WNT9BO14905 357 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ATP2A1O14983 1001 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 SMAD9O15198 467 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ADAMDEC1O15204 470 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 WDR46O15213 610 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 TLR2O60603 784 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 FSHBP01225 129 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 MAOAP21397 527 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 CPT2P23786 658 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ME1P48163 572 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PPP3CCP48454 512 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ALDH7A1P49419 539 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PPP5CP53041 499 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 CSE1LP55060 971 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 RBP5P82980 135 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 GRIK2Q13002 908 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF805Q5CZA5 627 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PPP6R3Q5H9R7 873 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 CEP78Q5JTW2 689 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 Q5PR19 223 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 C11orf88Q6PI97 169 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF66Q6ZN08 573 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 MTSS1LQ765P7 747 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 MMP21Q8N119 569 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 FAM98AQ8NCA5 519 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 OR6J1Q8NGC5 347 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PIGOQ8TEQ8 1089 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 LPGAT1Q92604 370 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 LPAR1Q92633 364 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PTERQ96BW5 349 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 GAD1Q99259 594 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 WDR77Q9BQA1 342 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 TMEM39BQ9GZU3 492 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 CATSPERBQ9H7T0 1116 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 MAP6D1Q9H9H5 199 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 MKKSQ9NPJ1 570 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 SELENONQ9NZV5 590 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 DNAJB4Q9UDY4 337 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 OR14J1Q9UGF5 321 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 DDX25Q9UHL0 483 aaKnown RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 TTC7AQ9ULT0 858 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 CLIC4Q9Y696 253 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PLA2R1Q13018 1463 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 CROCC2H7BZ55 1655 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ADGBQ8N7X0 1667 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 RTEL1-TNFRSF6BF6WH68 1400 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 TRAPPC8Q9Y2L5 1435 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 PREX2Q70Z35 1606 aa4.79□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZMYM2Q9UBW7 1377 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 TTC37Q6PGP7 1564 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 SOS1Q07889 1333 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 A0A0G2JK05 382 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 SMIM35A0A1B0GVV1 85 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 C1orf226A1L170 272 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 A6NNC1 897 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 CYR61O00622 381 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 GH2P01242 217 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 CHRNB1P11230 501 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 ERCC2P18074 760 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 MCCP23508 829 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 ENTPD1P49961 510 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 RAB28P51157 221 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCR3P51677 355 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 HMGA2P52926 109 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 PROK1P58294 105 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 SIRPAP78324 504 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 TMF1P82094 1093 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 KRT33BQ14525 404 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 DAZAP2Q15038 168 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 DUSP6Q16828 381 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCDC184Q52MB2 194 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 KRBOX4Q5JUW0 171 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 NUGGCQ68CJ6 796 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 PET117Q6UWS5 81 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 MON1BQ7L1V2 547 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 TAOK1Q7L7X3 1001 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 PLPPR4Q7Z2D5 763 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 METTL23Q86XA0 190 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 DSELQ8IZU8 1212 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 SPATA6LQ8N4H0 392 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 TTC30BQ8N4P2 665 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 GPATCH11Q8N954 259 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 HDAC11Q96DB2 347 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 TMEM79Q9BSE2 394 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 MSTO1Q9BUK6 570 aa4.78□□□□□ -1.64
HMGB3P18-201ENST00000406327 SPATC1LQ9H0A9 340 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms