RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 VPS26BQ4G0F5 336 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 PLA2G4FQ68DD2 849 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 GLYATQ6IB77 296 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 IKBIPQ70UQ0 350 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 SPATA6LQ8N4H0 392 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 PACRGLQ8N7B6 248 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 LINC01465Q8N7H1 131 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 SLCO2A1Q92959 643 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 SNAPC3Q92966 411 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 NIF3L1Q9GZT8 377 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 POLR3FQ9H1D9 316 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-203ENST00000406072 FARSBQ9NSD9 589 aaKnown RBP5.84□□□□□ -1.47
HDAC9-203ENST00000406072 NKIRAS2Q9NYR9 191 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 TAS2R9Q9NYW1 312 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 TBX20Q9UMR3 447 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 EDARQ9UNE0 448 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 PCDHB12Q9Y5F1 795 aa5.84□□□□□ -1.47
HDAC9-203ENST00000406072 IGKV6-21A0A0C4DH24 114 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 A0A0J9YYE9 177 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 FAM92AA1XBS5 289 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 ERI2A8K979 691 aaKnown RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 CD3EAPO15446 510 aaKnown RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 PMPCBO75439 489 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 CELF2O95319 508 aaKnown RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 GPIP06744 558 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 ANXA6P08133 673 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 HGFP14210 728 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 FOSL2P15408 326 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 PTPN1P18031 435 aaKnown RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 RPS3P23396 243 aaKnown RBP eCLIP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 GRIK1P39086 918 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 STARP49675 285 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 TPI1P60174 286 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 CYP4F8P98187 520 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 BAATQ14032 418 aaPredicted RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 NR6A1Q15406 480 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 TARBP2Q15633 366 aaKnown RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 SWI5Q1ZZU3 235 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 LRRC38Q5VT99 294 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 TIGD7Q6NT04 549 aaPredicted RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 KCNT2Q6UVM3 1135 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 R3HCC1LQ7Z5L2 792 aaKnown RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 SLC22A9Q8IVM8 553 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 ELMOD1Q8N336 334 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 METTL25Q8N6Q8 603 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 CDYL2Q8N8U2 506 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 GLIS1Q8NBF1 620 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 SPPL2AQ8TCT8 520 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 FAM167AQ96KS9 214 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 C8orf48Q96LL4 319 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 ZNF285Q96NJ3 590 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 FIZ1Q96SL8 496 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 VAT1Q99536 393 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 PTPN18Q99952 460 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 SLC22A4Q9H015 551 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 CHMP1AQ9HD42 196 aaPredicted RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 ARMC1Q9NVT9 282 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 AJAP1Q9UKB5 411 aaPredicted RBP5.84□□□□□ -1.48
HDAC9-203ENST00000406072 IKZF3Q9UKT9 509 aa5.84□□□□□ -1.48
HDAC9-203ENST00000406072 CCL15-CCL14A0A0B4J2E2 113 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TMEM88BA6NKF7 163 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 B8ZZF3 427 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ORC5O43913 435 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NOBOXO60393 691 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 XYLBO75191 536 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 HMGCRP04035 888 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 IL7P13232 177 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RPL10P27635 214 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ADORA2BP29275 332 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PPP5CP53041 499 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ACLYP53396 1101 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ATP12AP54707 1039 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 GCNT1Q02742 428 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MXD1Q05195 221 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CCL15Q16663 113 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SEZ6Q53EL9 994 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 PXDC1Q5TGL8 231 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SWSAP1Q6NVH7 229 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 LINC00523Q86TU6 105 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RALGPS2Q86X27 583 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ALDH16A1Q8IZ83 802 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 ANKRD52Q8NB46 1076 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 NKD2Q969F2 451 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 CERS2Q96G23 380 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SH3YL1Q96HL8 342 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 MUS81Q96NY9 551 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 RACGAP1Q9H0H5 632 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TRIT1Q9H3H1 467 aaKnown RBP5.83□□□□□ -1.48
HDAC9-203ENST00000406072 REEP1Q9H902 201 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 TXNRD2Q9NNW7 524 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 AMBNQ9NP70 447 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 INIPQ9NRY2 104 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 XPR1Q9UBH6 696 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 FETUBQ9UGM5 382 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 INVSQ9Y283 1065 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 SLC27A5Q9Y2P5 690 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 BOLA1Q9Y3E2 137 aa5.83□□□□□ -1.48
HDAC9-203ENST00000406072 UGT2A1Q9Y4X1 527 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms