RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 KIF18AQ8NI77 898 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 PTERQ96BW5 349 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 SIPA1Q96FS4 1042 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF419Q96HQ0 510 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 EGLN2Q96KS0 407 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 ACOX2Q99424 681 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 WDR83Q9BRX9 315 aaKnown RBP4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 WACQ9BTA9 647 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 RETREG1Q9H6L5 497 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 DNAJB4Q9UDY4 337 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 RASAL2Q9UJF2 1139 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 FBXW11Q9UKB1 542 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 RAP2CQ9Y3L5 183 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 CLIC4Q9Y696 253 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 TMEM202A6NGA9 273 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 A6NNC1 897 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ATP2A1O14983 1001 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 GPC4O75487 556 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ATP5BP06576 529 aaKnown RBP4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ENO3P13929 434 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 PRLRP16471 622 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ATP5DP30049 168 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 CSE1LP55060 971 aaKnown RBP4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 SPOCK1Q08629 439 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ITGADQ13349 1161 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ARHGEF6Q15052 776 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ASIC2Q16515 512 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 HYAL4Q2M3T9 481 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ANKRD54Q6NXT1 300 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 TMEM71Q6P5X7 295 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 C9orf47Q6ZRZ4 202 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 CAMKMTQ7Z624 323 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ADIPOR2Q86V24 386 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 IQCA1Q86XH1 822 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 SFTPA2Q8IWL1 248 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 HORMAD2Q8N7B1 307 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 TEX45Q8NA69 505 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 MCUQ8NE86 351 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 OR10S1Q8NGN2 331 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 LPGAT1Q92604 370 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 FAM162AQ96A26 154 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF333Q96JL9 665 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 LINC00615Q96LM1 132 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 HARBI1Q96MB7 349 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 MSTO1Q9BUK6 570 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 SLC25A23Q9BV35 468 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 B3GNT4Q9C0J1 378 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 MMP27Q9H306 513 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 KLHL31Q9H511 634 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 SLC28A3Q9HAS3 691 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 MKKSQ9NPJ1 570 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 MBNL1Q9NR56 388 aaKnown RBP4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 POT1Q9NUX5 634 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ERVK-11Q9UQG0 969 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF148Q9UQR1 794 aa4.95□□□□□ -1.62
HMGB1P13-201ENST00000406019 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 FAM90A10PA6NDY2 464 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 MAGEB17A8MXT2 336 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 PRPF4O43172 522 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 SPRY1O43609 319 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 TADA2AO75478 443 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 NDUFB8O95169 186 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 HOXB2P14652 356 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 PTMSP20962 102 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 HOXC9P31274 260 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 TLX1P31314 330 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 MC5RP33032 325 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 PRCPP42785 496 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 INPP5JQ15735 1006 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 DLK2Q6UY11 383 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 MTSS1LQ765P7 747 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 PI4KAP1Q8N8J0 262 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 OR8K5Q8NH50 307 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 MOAP1Q96BY2 351 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 NAF1Q96HR8 494 aaKnown RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 DACH2Q96NX9 599 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 CDRT15Q96T59 188 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 MRPL9Q9BYD2 267 aaKnown RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 NPFFR1Q9GZQ6 430 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 LHPPQ9H008 270 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 ESRP2Q9H6T0 727 aaKnown RBP4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 CYSLTR2Q9NS75 346 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 OLAHQ9NV23 265 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 COG5Q9UP83 839 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 STON1Q9Y6Q2 735 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF541Q9H0D2 1346 aa4.94□□□□□ -1.62
HMGB1P13-201ENST00000406019 BICDL2A1A5D9 508 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CD8B2A6NJW9 211 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 AKR1B15C9JRZ8 316 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 VCYO14598 125 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 SMAD9O15198 467 aaKnown RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 RGS11O94810 467 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 BAG2O95816 211 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 TFPIP10646 304 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CCR10P46092 362 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 COMPP49747 757 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 POLGP54098 1239 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 TMF1P82094 1093 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms