RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PDILTQ8N807 584 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 FRMD1Q8N878 549 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 TMEM163Q8TC26 289 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CREB3L4Q8TEY5 395 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 DNAAF4Q8WXU2 420 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 SMARCE1Q969G3 411 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 FBXL8Q96CD0 374 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 HMCESQ96FZ2 354 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 STRA6Q9BX79 667 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 MUC13Q9H3R2 512 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 TBC1D22BQ9NU19 505 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 SEPT11Q9NVA2 429 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 TMEM51Q9NW97 253 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CISD1Q9NZ45 108 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 ABI3Q9P2A4 366 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 SLCO3A1Q9UIG8 710 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 SRPRBQ9Y5M8 271 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 PTGDR2Q9Y5Y4 395 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 LAMB2P55268 1798 aa5.09□□□□□ -1.6
HMGB3P19-201ENST00000403971 COL24A1Q17RW2 1714 aa5.09□□□□□ -1.6
HMGB3P19-201ENST00000403971 MAP3K15Q6ZN16 1313 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 FSD2A1L4K1 749 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 TTC36A6NLP5 189 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ERVV-1B6SEH8 477 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 INAFM1C9JVW0 142 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 TIMM23O14925 209 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ITM2AO43736 263 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZBED4O75132 1171 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 CCNDBP1O95273 360 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 SCGB1D1O95968 90 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 TOMM40O96008 361 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ACADMP11310 421 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 CDK4P11802 303 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 RARGP13631 454 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 MYL6BP14649 208 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 MYF6P23409 242 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 MLH1P40692 756 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 GABRB2P47870 512 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 F2RL1P55085 397 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 GPS2Q13227 327 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 C2orf68Q2NKX9 166 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 MMEL1Q495T6 779 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 HSP90AB3PQ58FF7 597 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 FNBP1LQ5T0N5 605 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 BEND3Q5T5X7 828 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ITPRIPL1Q6GPH6 555 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 IKBIPQ70UQ0 350 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 CCDC13Q8IYE1 715 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZBTB2Q8N680 514 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 PI4KAP1Q8N8J0 262 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 HUS1BQ8NHY5 278 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 SMG7Q92540 1137 aaKnown RBP5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 USP6NLQ92738 828 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 MMABQ96EY8 250 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 CAMK1GQ96NX5 476 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 RBM38Q9H0Z9 239 aaKnown RBP5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 FBRSL1Q9HCM7 1045 aaKnown RBP5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 ASAH2Q9NR71 780 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 CNOT8Q9UFF9 292 aaKnown RBP5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 AAR2Q9Y312 384 aaKnown RBP5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 NFE2L3Q9Y4A8 694 aa5.08□□□□□ -1.6
HMGB3P19-201ENST00000403971 UTYO14607 1347 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 SPRY3O43610 288 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 TIPRLO75663 272 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 CRYABP02511 175 aaKnown RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 KRT10P13645 584 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 COMPP49747 757 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 ARF3P61204 181 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 ARF1P84077 181 aaKnown RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 SORDQ00796 357 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 AIMP1Q12904 312 aaKnown RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 MAMLD1Q13495 774 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 DPCR1Q3MIW9 517 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 CXorf66Q5JRM2 361 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 OTUD1Q5VV17 481 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM205BPQ63HN1 556 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 ANKRD54Q6NXT1 300 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 MZT2BQ6NZ67 158 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 CLEC4GQ6UXB4 293 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 KIF6Q6ZMV9 814 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 TECPR1Q7Z6L1 1165 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 ITPRIPQ8IWB1 547 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 NEXN-AS1Q8NBZ9 246 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 EXOC6Q8TAG9 804 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM149B1Q96BN6 582 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 FCRL4Q96PJ5 515 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 C1QTNF5Q9BXJ0 243 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 FTOQ9C0B1 505 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 EIF2B3Q9NR50 452 aaKnown RBP5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 OR6C3Q9NZP0 311 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 TNNQ9UQP3 1299 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 EVPLQ92817 2033 aa5.07□□□□□ -1.6
HMGB3P19-201ENST00000403971 DDX60Q8IY21 1712 aaKnown RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 LIPT2A6NK58 231 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 HNRNPCL1O60812 293 aaKnown RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 GFPT2O94808 682 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 CAMTA2O94983 1202 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 NKX2-2O95096 273 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 EIF2S1P05198 315 aaKnown RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 IGKV5-2P06315 115 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms