RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NLE1Q9NVX2 485 aaPredicted RBP17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 UCKL1Q9NWZ5 548 aa17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC2A6Q9UGQ3 507 aa17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SNX24Q9Y343 169 aa17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 OAS3Q9Y6K5 1087 aaKnown RBP17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DOCK9Q9BZ29 2069 aa17.06■□□□□ 0.32
PTCHD3P3-201ENST00000403073 FAM187AA6NFU0 413 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 EFCAB8A8MWE9 144 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 TNFRSF10CO14798 259 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SRP72O76094 671 aaKnown RBP17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC25A14O95258 325 aaPredicted RBP17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PRAMEF1O95521 474 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ASMTLO95671 621 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ZNF883P0CG24 379 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 EPHA8P29322 1005 aaPredicted RBP17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 HADHAP40939 763 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ARSDP51689 593 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 C1orf61Q13536 156 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PEX6Q13608 980 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 TCEA2Q15560 299 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 TSTD2Q5T7W7 516 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PDPK2PQ6A1A2 396 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 MARK2Q7KZI7 788 aaKnown RBP17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 MAATS1Q7Z4T9 603 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PCGF5Q86SE9 256 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC25A45Q8N413 288 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PPHLN1Q8NEY8 458 aaKnown RBP17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DTX3LQ8TDB6 740 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 GLYATL1Q969I3 302 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CDKN2AIPNLQ96HQ2 116 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 TBATAQ96M53 351 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SERPINB12Q96P63 405 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 IL22Q9GZX6 179 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 FAM96AQ9H5X1 160 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CYP4F12Q9HCS2 524 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SYBUQ9NX95 663 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 APPL1Q9UKG1 709 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC17A4Q9Y2C5 497 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 TCAF1Q9Y4C2 921 aa17.05■□□□□ 0.32
PTCHD3P3-201ENST00000403073 LRRK1Q38SD2 2015 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 EP300Q09472 2414 aaPredicted RBP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PRSS38A1L453 326 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PCDHGA12O60330 932 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 MTX2O75431 263 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PIAS2O75928 621 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 RASGRP1O95267 797 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 TNFP01375 233 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 MLNP12872 115 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DGKAP23743 735 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PSMA3P25788 255 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 MC4RP32245 332 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 RPL21P46778 160 aaKnown RBP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 HK3P52790 923 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 HNRNPKP61978 463 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC14A1Q13336 389 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 LAMB3Q13751 1172 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SKIDA1Q1XH10 827 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DBX2Q6ZNG2 339 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 KANSL1Q7Z3B3 1105 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 MPP5Q8N3R9 675 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 OR13J1Q8NGT2 312 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 LMX1AQ8TE12 382 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SNF8Q96H20 258 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 VPS35Q96QK1 796 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 C19orf43Q9BQ61 176 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ERP44Q9BS26 406 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC13A1Q9BZW2 595 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DPH5Q9H2P9 285 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ASB8Q9H765 288 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 XAB2Q9HCS7 855 aaKnown RBP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 APOBEC3BQ9UH17 382 aaKnown RBP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CDV3Q9UKY7 258 aaKnown RBP17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PCDHGB2Q9Y5G2 931 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DGKBQ9Y6T7 804 aa17.04■□□□□ 0.32
PTCHD3P3-201ENST00000403073 H3BM21 787 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SLC30A4O14863 429 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 YKT6O15498 198 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SH3BP5O60239 455 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 GNPDA1P46926 289 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CDKN1CP49918 316 aaPredicted RBP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ITGA8P53708 1063 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ITGA9Q13797 1035 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SUZ12Q15022 739 aaKnown RBP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 KHDC1Q4VXA5 237 aaKnown RBP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PRRT3Q5FWE3 981 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 HIBCHQ6NVY1 386 aaPredicted RBP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 NLRP9Q7RTR0 991 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ADGRG6Q86SQ4 1221 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 HOOK3Q86VS8 718 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 AGGF1Q8N302 714 aaeCLIP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 ZNF548Q8NEK5 533 aaPredicted RBP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 GDAP1Q8TB36 358 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SETD7Q8WTS6 366 aaKnown RBP17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 HDAC10Q969S8 669 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PWWP2AQ96N64 755 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
PTCHD3P3-201ENST00000403073 LRRC1Q9BTT6 524 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms