RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 TK2O00142 265 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-203ENST00000402554 TRIM13O60858 407 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 DNAJC6O75061 913 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 CTPS1P17812 591 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 SERPINA4P29622 427 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 LIG3P49916 1009 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 SATB1Q01826 763 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 ACTN3Q08043 901 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-203ENST00000402554 FAM83EQ2M2I3 478 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 GALNTL6Q49A17 601 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 C22orf39Q6P5X5 142 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 FSTL5Q8N475 847 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-203ENST00000402554 TMEM151AQ8N4L1 468 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 OR6Y1Q8NGX8 325 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 PPP4R1Q8TF05 950 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 TCF12Q99081 682 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 GPR63Q9BZJ6 419 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 CEP44Q9C0F1 390 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 IGSF5Q9NSI5 407 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 OXSMQ9NWU1 459 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 KCNK4Q9NYG8 393 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 FKBPLQ9UIM3 349 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 SLC12A4Q9UP95 1085 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 PKP3Q9Y446 797 aa13.04□□□□□ -0.32
NDEL1-203ENST00000402554 USP34Q70CQ2 3546 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 K7EQS6 105 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 ITM2AO43736 263 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 LYPLA1O75608 230 aaPredicted RBP13.03□□□□□ -0.32
NDEL1-203ENST00000402554 FSBPO95073 299 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 SBK3P0C264 359 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 DRD1P21728 446 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 GKP32189 559 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 MC4RP32245 332 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 PRKAA2P54646 552 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 CDKN2DP55273 166 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 ABCE1P61221 599 aaKnown RBP13.03□□□□□ -0.32
NDEL1-203ENST00000402554 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 CSHL1Q14406 222 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 PTPRRQ15256 657 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 MYLK3Q32MK0 819 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 ZNF549Q6P9A3 640 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 SPATA6LQ8N4H0 392 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 PCDH20Q8N6Y1 951 aaKnown RBP13.03□□□□□ -0.32
NDEL1-203ENST00000402554 RPLP0P6Q8NHW5 317 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 HEXDCQ8WVB3 486 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 ERP27Q96DN0 273 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 MRPL57Q9BQC6 102 aaKnown RBP13.03□□□□□ -0.32
NDEL1-203ENST00000402554 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 MYLK2Q9H1R3 596 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 MRPL46Q9H2W6 279 aaKnown RBP13.03□□□□□ -0.32
NDEL1-203ENST00000402554 BPIFA1Q9NP55 256 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 XPR1Q9UBH6 696 aa13.03□□□□□ -0.32
NDEL1-203ENST00000402554 MARCOQ9UEW3 520 aaPredicted RBP13.03□□□□□ -0.32
NDEL1-203ENST00000402554 DMDP11532 3685 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 A0A0J9YYE9 177 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.02□□□□□ -0.32
NDEL1-203ENST00000402554 TMEM114B3SHH9 223 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 TARM1B6A8C7 271 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 H7C0S8 307 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 PFDN6O15212 129 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 LAMTOR5O43504 91 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 NDUFS3O75489 264 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 KAT7O95251 611 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 TRBC1P01850 177 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 ALPIP09923 528 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 LTA4HP09960 611 aaKnown RBP13.02□□□□□ -0.32
NDEL1-203ENST00000402554 PRSS56P0CW18 603 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 CCDC166P0CW27 439 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 KITP10721 976 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 FDXRP22570 491 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 HMGCLP35914 325 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 SLC26A3P40879 764 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 BNIP1Q12981 228 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 ACCSLQ4AC99 568 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 LIPMQ5VYY2 423 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 KLC3Q6P597 504 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.02□□□□□ -0.32
NDEL1-203ENST00000402554 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 SIKE1Q9BRV8 207 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 AARSD1Q9BTE6 412 aaKnown RBP13.02□□□□□ -0.32
NDEL1-203ENST00000402554 IL17CQ9P0M4 197 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 DNAJC16Q9Y2G8 782 aa13.02□□□□□ -0.32
NDEL1-203ENST00000402554 BPTFQ12830 3046 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 BNIP3LO60238 219 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 WISP3O95389 354 aaPredicted RBP13.02□□□□□ -0.33
NDEL1-203ENST00000402554 APODP05090 189 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 MAGEA9P43362 315 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 PTPN5P54829 565 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 CSTF1Q05048 431 aaKnown RBP13.02□□□□□ -0.33
NDEL1-203ENST00000402554 PEX6Q13608 980 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 C2orf27AQ580R0 203 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 CARD16Q5EG05 197 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms