RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 PPP1R3EQ9H7J1 279 aa4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 MMP25Q9NPA2 562 aa4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 HINT3Q9NQE9 182 aaKnown RBP4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 HCFC1R1Q9NWW0 138 aa4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 LYVE1Q9Y5Y7 322 aa4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 CAPN7Q9Y6W3 813 aa4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 RUSC2Q8N2Y8 1516 aa4.4□□□□□ -1.7
SAMSN1-202ENST00000400564 KDM3AQ9Y4C1 1321 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 FAM170AA1A519 330 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 BEST1O76090 585 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 CAMTA2O94983 1202 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 FTCDO95954 541 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 GLULP15104 373 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 CDAP32320 146 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 ICAM3P32942 547 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 ACSL1P33121 698 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 METAP2P50579 478 aaKnown RBP eCLIP4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 SLC20A2Q08357 652 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 RASA2Q15283 850 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 CTF1Q16619 201 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 UNQ6126/PRO20091Q6UXV3 157 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 Q6ZTC4 211 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 CCDC13Q8IYE1 715 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 POC1AQ8NBT0 407 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 WFIKKN2Q8TEU8 576 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 SCFD2Q8WU76 684 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 DNASE2BQ8WZ79 361 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 FIG4Q92562 907 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 SLC41A2Q96JW4 573 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 PIP5K1AQ99755 562 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 FAM110AQ9BQ89 295 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 SIL1Q9H173 461 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 MUC13Q9H3R2 512 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 LIMA1Q9UHB6 759 aaKnown RBP4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 INTS6Q9UL03 887 aaKnown RBP4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 CEPT1Q9Y6K0 416 aa4.4□□□□□ -1.71
SAMSN1-202ENST00000400564 IGHV4OR15-8A0A075B7B6 117 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 LRRC53A6NM62 1247 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 AGAP14A8MT82 685 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 USP17L23D6RBM5 183 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 TGFB1I1O43294 461 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 RFPL2O75678 378 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 IL7RP16871 459 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 GCH1P30793 250 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 GABRB2P47870 512 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 ROR1Q01973 937 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 CDC16Q13042 620 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 STK4Q13043 487 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 GSTA3Q16772 222 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 DUSP28Q4G0W2 176 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 CCNI2Q6ZMN8 369 aaPredicted RBP4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 TUBA1AQ71U36 451 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 NAGSQ8N159 534 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 WDTC1Q8N5D0 677 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 RFLNBQ8N5W9 214 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 DUSP19Q8WTR2 217 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 JAKMIP2Q96AA8 810 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 CNDP2Q96KP4 475 aaKnown RBP4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 PCYT2Q99447 389 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 TUBA1CQ9BQE3 449 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 MAK16Q9BXY0 300 aaKnown RBP4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 CSTL1Q9H114 145 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 SMARCAD1Q9H4L7 1026 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 KIF9Q9HAQ2 790 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 CHORDC1Q9UHD1 332 aaPredicted RBP4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 ZHX1Q9UKY1 873 aaPredicted RBP4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 VDAC3Q9Y277 283 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 PCDHAC2Q9Y5I4 1007 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 KCNE2Q9Y6J6 123 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 WDR81Q562E7 1941 aa4.39□□□□□ -1.71
SAMSN1-202ENST00000400564 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 XPNPEP2O43895 674 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 ERAL1O75616 437 aaKnown RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 ADRB2P07550 413 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 F7P08709 466 aaPredicted RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 RARGP13631 454 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 BSGP35613 385 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 NNMTP40261 264 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 HNRNPH2P55795 449 aaKnown RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 RPL7AP62424 266 aaKnown RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 ECT2LQ008S8 904 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 RELQ04864 619 aaPredicted RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 EPS8Q12929 822 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 PRPF4BQ13523 1007 aaKnown RBP4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 TMEM266Q2M3C6 531 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 GPR139Q6DWJ6 353 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 RGMBQ6NW40 437 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 CYP20A1Q6UW02 462 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 KRT74Q7RTS7 529 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 WDR63Q8IWG1 891 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 TEX11Q8IYF3 940 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 ZNF34Q8IZ26 560 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 FRMD1Q8N878 549 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 NKAIN3Q8N8D7 197 aa4.38□□□□□ -1.71
SAMSN1-202ENST00000400564 KBTBD3Q8NAB2 608 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms