RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ARNTL2Q8WYA1 636 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NDRG1Q92597 394 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NT5C3BQ969T7 300 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 LOXL4Q96JB6 756 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 ZNF560Q96MR9 790 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 ZNF778Q96MU6 729 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 SLC2A13Q96QE2 648 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 TSPAN18Q96SJ8 248 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NPY6RQ99463 290 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 HNRNPABQ99729 332 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 CCDC106Q9BWC9 280 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 SLC13A1Q9BZW2 595 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 C20orf27Q9GZN8 174 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 FAM49AQ9H0Q0 323 aaPredicted RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 SNX25Q9H3E2 840 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NELFAQ9H3P2 528 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 DCLRE1BQ9H816 532 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 XPNPEP3Q9NQH7 507 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 RNF181Q9P0P0 153 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 PLA2G4CQ9UP65 541 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 ZFR2Q9UPR6 939 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 HBS1LQ9Y450 684 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 HES2Q9Y543 173 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NR2E3Q9Y5X4 410 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NUP205Q92621 2012 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ALG1L2C9J202 215 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 BTBD19C9JJ37 291 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 RNF103O00237 685 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PDHXO00330 501 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 DCLK1O15075 740 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 GYG2O15488 501 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 FOXS1O43638 330 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PLIN3O60664 434 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 MAGEC1O60732 1142 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 KRT36O76013 467 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PRKCGP05129 697 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 SMIM10L2AP0DMW4 78 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 SMIM10L2BP0DMW5 78 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 FGF3P11487 239 aaPredicted RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 CYP2C9P11712 490 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PGAM1P18669 254 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ATP6V1C1P21283 382 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 AKAP5P24588 427 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 MGAT1P26572 445 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PNPLA4P41247 253 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PTDSS1P48651 473 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 TAF6P49848 677 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 SULT1E1P49888 294 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PITX1P78337 314 aaPredicted RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 EFEMP1Q12805 493 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 TUBB3Q13509 450 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 RIN1Q13671 783 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 BLMHQ13867 455 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PDE1CQ14123 709 aaPredicted RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 FRG1Q14331 258 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ICAM4Q14773 271 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 KPNB1Q14974 876 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 FASTKD1Q53R41 847 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ACSBG2Q5FVE4 666 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 TEDDM1Q5T9Z0 273 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 PAQR9Q6ZVX9 377 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 FAM131BQ86XD5 332 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 CRLF3Q8IUI8 442 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ARID3BQ8IVW6 561 aaPredicted RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 HACE1Q8IYU2 909 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 P2RY11Q96G91 374 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 NAF1Q96HR8 494 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ZNF333Q96JL9 665 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 RPL10LQ96L21 214 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 GPHA2Q96T91 129 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 LGMNQ99538 433 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 APOL6Q9BWW8 343 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 DUSP16Q9BY84 665 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 WWP1Q9H0M0 922 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 AGO3Q9H9G7 860 aaKnown RBP6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 THAP1Q9NVV9 213 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 ARMCX1Q9P291 453 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 IGSF9Q9P2J2 1179 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 SLC17A6Q9P2U8 582 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 NRCAMQ92823 1304 aa6.84□□□□□ -1.31
CSNK2A1-204ENST00000400227 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.32
CSNK2A1-204ENST00000400227 A0A1W2PR48 441 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 F5H423 210 aaPredicted RBP6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 H0Y3Z8 333 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 CLDN5O00501 218 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 TPP1O14773 563 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 MTSS1O43312 755 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 ITM2AO43736 263 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 GLRA3O75311 464 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 PSMG1O95456 288 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 TOP3BO95985 862 aaKnown RBP6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 ALDOAP04075 364 aaKnown RBP6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 JUNP05412 331 aaKnown RBP6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 ENO1P06733 434 aaKnown RBP6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 PSMB4P28070 264 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 LRPAP1P30533 357 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 PGM1P36871 562 aa6.83□□□□□ -1.32
CSNK2A1-204ENST00000400227 MAGEA12P43365 314 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms