RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SPIDRQ14159 915 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 LSM12Q3MHD2 195 aaKnown RBP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 ADGRF1Q5T601 910 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 RBM23Q86U06 439 aaKnown RBP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 RELL1Q8IUW5 271 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 PEBP4Q96S96 227 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 HTATIP2Q9BUP3 242 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 OSBPL11Q9BXB4 747 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 DENND2DQ9H6A0 471 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 IPPKQ9H8X2 491 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 S100A14Q9HCY8 104 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 FCF1Q9Y324 198 aaKnown RBP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 KRT75O95678 551 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 GSNP06396 782 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 HOXB6P17509 224 aaKnown RBP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 GHRHRQ02643 423 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 GALNT2Q10471 571 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 PPIGQ13427 754 aaKnown RBP eCLIP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 CAPN13Q6MZZ7 669 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 PROSER1Q86XN7 944 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 TNKS2Q9H2K2 1166 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 LRTM1Q9HBL6 345 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 PDLIM7Q9NR12 457 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 SCML2Q9UQR0 700 aa14.16□□□□□ -0.14
PCDHGA11-201ENST00000398587 ATG13O75143 517 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 PRNPP04156 253 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 IFNGR2P38484 337 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 GSSP48637 474 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 MRPS15P82914 257 aaKnown RBP14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 UBE3AQ05086 875 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 SERPINA9Q86WD7 417 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 RASAL3Q86YV0 1011 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ACDQ96AP0 544 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZBED3Q96IU2 234 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CRTAC1Q9NQ79 661 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CXorf49A8MYA2 514 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 H3BM21 787 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CTSEP14091 401 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 PTPN2P17706 415 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 TNNI3P19429 210 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 TLX1P31314 330 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 IDH3AP50213 366 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 SLC10A7Q0GE19 358 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZNF697Q5TEC3 545 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ANXA8L1Q5VT79 327 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CLEC6AQ6EIG7 209 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 KREMEN2Q8NCW0 462 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ADCY4Q8NFM4 1077 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 OR2T12Q8NG77 320 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 C10orf82Q8WW14 230 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 USP7Q93009 1102 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CXorf40BQ96DE9 158 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 TSSK3Q96PN8 268 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZNF490Q9ULM2 529 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 ILVBLA1L0T0 632 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 H0YGN5 161 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CLTBP09497 229 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 UROSP10746 265 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 HTR1BP28222 390 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 RPIAP49247 311 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 TOP3AQ13472 1001 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 MSS51Q4VC12 460 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 BHLHB9Q6PI77 547 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 TBC1D21Q8IYX1 336 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 CLPTM1LQ96KA5 538 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 NFS1Q9Y697 457 aa14.15□□□□□ -0.14
PCDHGA11-201ENST00000398587 MSX2P35548 267 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 TLE2Q04725 743 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZNF460Q14592 562 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 TSNQ15631 228 aaKnown RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 KIAA1324Q6UXG2 1013 aaKnown RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZNF655Q8N720 491 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 BEND7Q8N7W2 519 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 SEC14L1Q92503 715 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 B3GALT6Q96L58 329 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZNF317Q96PQ6 595 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 GRIP2Q9C0E4 1043 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 NOL11Q9H8H0 719 aaKnown RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 ANGPT4Q9Y264 503 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 A8MUI8 341 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 CYP7B1O75881 506 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 SWT1Q5T5J6 900 aaKnown RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 DNAJB7Q7Z6W7 309 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZNF605Q86T29 641 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 CPNE9Q8IYJ1 553 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 TSPAN14Q8NG11 270 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 SKA1Q96BD8 255 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 AP2M1Q96CW1 435 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 VPS4AQ9UN37 437 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 HS3ST4Q9Y661 456 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 AP4B1Q9Y6B7 739 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 NAV1Q8NEY1 1877 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 CCDC162PA2VCL2 907 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 UBXN8O00124 270 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 LRATO95237 230 aa14.14□□□□□ -0.15
PCDHGA11-201ENST00000398587 PCSK2P16519 638 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms