RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 PRAMEF1O95521 474 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 NME1P15531 152 aaKnown RBP25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 JUNDP17535 347 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 KELP23276 732 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 ADRA1DP25100 572 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 CA5AP35218 305 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 RXRGP48443 463 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 SRP54P61011 504 aaKnown RBP25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 ZNF648Q5T619 568 aaPredicted RBP25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 PHACTR4Q8IZ21 702 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 NETO1Q8TDF5 533 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 COX14Q96I36 57 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 CHRAC1Q9NRG0 131 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 NLE1Q9NVX2 485 aaPredicted RBP25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 SYBUQ9NX95 663 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 SLC2A6Q9UGQ3 507 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 TMPRSS11EQ9UL52 423 aa25.18■■□□□ 1.62
TMEM55B-202ENST00000398020 LRP4O75096 1905 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 EFCAB8A8MWE9 144 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 CEACAM5P06731 702 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 EPHA8P29322 1005 aaPredicted RBP25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 ARHGAP8P85298 464 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 MARK2Q7KZI7 788 aaKnown RBP25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 MAATS1Q7Z4T9 603 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 MCUQ8NE86 351 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 PPHLN1Q8NEY8 458 aaKnown RBP25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 STYXQ8WUJ0 223 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 GLYATL1Q969I3 302 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 SERPINB12Q96P63 405 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 RANBP9Q96S59 729 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 FRMD8Q9BZ67 464 aaPredicted RBP25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 IL22Q9GZX6 179 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 CYP4F12Q9HCS2 524 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 UCKL1Q9NWZ5 548 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 TCAF1Q9Y4C2 921 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 AP3B1O00203 1094 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 MTX2O75431 263 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 SLC25A14O95258 325 aaPredicted RBP25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 ASMTLO95671 621 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 FUCA1P04066 466 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 HADHAP40939 763 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 NPY2RP49146 381 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 XIAPP98170 497 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 PEX6Q13608 980 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 TUBB2AQ13885 445 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 MPP5Q8N3R9 675 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 SAP25Q8TEE9 199 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 TUBB2BQ9BVA1 445 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 APOBEC3BQ9UH17 382 aaKnown RBP25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 SNX24Q9Y343 169 aa25.17■■□□□ 1.62
TMEM55B-202ENST00000398020 PRSS38A1L453 326 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 PIAS2O75928 621 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 SRP72O76094 671 aaKnown RBP25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 ARSDP51689 593 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 HK3P52790 923 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 LIMK1P53667 647 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 HNRNPKP61978 463 aaKnown RBP eCLIP25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 PCID2Q5JVF3 399 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 TSTD2Q5T7W7 516 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 PDPK2PQ6A1A2 396 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 PCGF5Q86SE9 256 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 OR13J1Q8NGT2 312 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 BTN2A2Q8WVV5 523 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 SNF8Q96H20 258 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 TBATAQ96M53 351 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 SLC13A1Q9BZW2 595 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 DPH5Q9H2P9 285 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 FAM96AQ9H5X1 160 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 XAB2Q9HCS7 855 aaKnown RBP25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 APPL1Q9UKG1 709 aa25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 CDV3Q9UKY7 258 aaKnown RBP25.16■■□□□ 1.62
TMEM55B-202ENST00000398020 FAM187AA6NFU0 413 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 ZNF883P0CG24 379 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 CD59P13987 128 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 DGKAP23743 735 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 MC4RP32245 332 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 RPL21P46778 160 aaKnown RBP25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 C1orf61Q13536 156 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 SKIDA1Q1XH10 827 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 RSPO4Q2I0M5 234 aaPredicted RBP25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 PRRT3Q5FWE3 981 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 PHYKPLQ8IUZ5 450 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 GDAP1Q8TB36 358 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 ZNF398Q8TD17 642 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 CDKN2AIPNLQ96HQ2 116 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 ASB8Q9H765 288 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 SLC17A4Q9Y2C5 497 aa25.15■■□□□ 1.62
TMEM55B-202ENST00000398020 H3BM21 787 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 SEC31AO94979 1220 aaKnown RBP25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 RASGRP1O95267 797 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 ITGA8P53708 1063 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 ITGA9Q13797 1035 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 KHDC1Q4VXA5 237 aaKnown RBP25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 CASC4Q6P4E1 433 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 SLC25A45Q8N413 288 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 ZNF548Q8NEK5 533 aaPredicted RBP25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 VPS35Q96QK1 796 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 ERP44Q9BS26 406 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 LRRC61Q9BV99 259 aa25.14■■□□□ 1.62
TMEM55B-202ENST00000398020 CARS2Q9HA77 564 aaKnown RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms