RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DNMT3BQ9UBC3 853 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 EGFL7Q9UHF1 273 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 PTGDR2Q9Y5Y4 395 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 DOCK3Q8IZD9 2030 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 A8MU76 341 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 KMOO15229 486 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 MAFKO60675 156 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 ALDOCP09972 364 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 NR4A1P22736 598 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 MZF1P28698 734 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CDC42EP1Q00587 391 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 PGS1Q32NB8 556 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 INAVAQ3KP66 663 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 TBCELQ5QJ74 424 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 TWF2Q6IBS0 349 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 USP43Q70EL4 1123 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 C11orf74Q86VG3 221 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 KLHDC8BQ8IXV7 354 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 S100ZQ8WXG8 99 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CCDC126Q96EE4 140 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 MAGEE1Q9HCI5 957 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 SMIM35A0A1B0GVV1 85 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 HHLA1C9JL84 531 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 KCNH1O95259 989 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 C7P10643 843 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ENDOUP21128 410 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ETFBP38117 255 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 KCNC1P48547 511 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 RAD23AP54725 363 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 CDH13P55290 713 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 STX1BP61266 288 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 MAPRE1Q15691 268 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 GPR162Q16538 588 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 LDLRAP1Q5SW96 308 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 MORN1Q5T089 497 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 SPPL2CQ8IUH8 684 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 CYGBQ8WWM9 190 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 TRIB2Q92519 343 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ZNF486Q96H40 463 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 IL12RB2Q99665 862 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 AKIP1Q9NQ31 210 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ENTPD7Q9NQZ7 604 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 THG1LQ9NWX6 298 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 NEU3Q9UQ49 428 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 SLC27A5Q9Y2P5 690 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 NME4O00746 187 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 NUAK1O60285 661 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 GUCY1B2O75343 617 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 UGT2B4P06133 528 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ENO2P09104 434 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 TNK2Q07912 1038 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 CAPRIN1Q14444 709 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 GPR158Q5T848 1215 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 HECTD2Q5U5R9 776 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 C8orf82Q6P1X6 216 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 PLEKHG7Q6ZR37 379 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 LARP4Q71RC2 724 aaKnown RBP eCLIP15.91■□□□□ 0.141e-7■■□□□ 13.4
CHMP1A-201ENST00000397901 C2orf69Q8N8R5 385 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ANKK1Q8NFD2 765 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 SH3RF2Q8TEC5 729 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 C19orf60Q96EN9 201 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 SLC45A3Q96JT2 553 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 TRIM8Q9BZR9 551 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 DSEQ9UL01 958 aa15.91■□□□□ 0.14
CHMP1A-201ENST00000397901 ILVBLA1L0T0 632 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 MATN3O15232 486 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 CELF2O95319 508 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 RBP1P09455 135 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 MBL2P11226 248 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 AXLP30530 894 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 LEPRP48357 1165 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 BFSP2Q13515 415 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 PCBP1Q15365 356 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 VPS26BQ4G0F5 336 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 ZNF773Q6PK81 442 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 AKAP14Q86UN6 197 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 PIM3Q86V86 326 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 PARP8Q8N3A8 854 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 SNX19Q92543 992 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 BEGAINQ9BUH8 593 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 C9orf16Q9BUW7 83 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 MUC3BQ9H195 1237 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 FANCEQ9HB96 536 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 SCUBE2Q9NQ36 999 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 C8orf4Q9NR00 106 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 MRGBPQ9NV56 204 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 A0A0J9YYE9 177 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 M0QX08 132 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 CLIC3O95833 236 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 SOX11P35716 441 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 ZNF135P52742 658 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 WNT3AP56704 352 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 YBX1P67809 324 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 IRF5Q13568 498 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 ATAD3BQ5T9A4 648 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 LINC00299Q6ZSB3 139 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 DSG4Q86SJ6 1040 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 HEATR4Q86WZ0 1026 aa15.9■□□□□ 0.14
CHMP1A-201ENST00000397901 EPHX4Q8IUS5 362 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms