RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C16orf59Q7L2K0 433 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RAB44Q7Z6P3 723 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SATL1Q86VE3 508 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 FBXO22Q8NEZ5 403 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LPCAT1Q8NF37 534 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LPGAT1Q92604 370 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SEMA6AQ9H2E6 1030 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 IL1RL2Q9HB29 575 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SEMA4BQ9NPR2 832 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 EPS15L1Q9UBC2 864 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SRRDQ9UH36 339 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MKI67P46013 3256 aaKnown RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TBKBP1A7MCY6 615 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AZIN1O14977 448 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TRIM24O15164 1050 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AOC2O75106 756 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 IRF1P10914 325 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 VARSP26640 1264 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC11A2P49281 568 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 STX1BP61266 288 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PHEXP78562 749 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ECT2LQ008S8 904 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TSNQ15631 228 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC30A3Q99726 388 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TUBB1Q9H4B7 451 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 BPIFA1Q9NP55 256 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SUCOQ9UBS9 1254 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RNF112Q9ULX5 631 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TBC1D30Q9Y2I9 924 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C15orf38-AP3S2A0A0A6YYH1 394 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CDC7O00311 574 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 COCHO43405 550 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CSPG5O95196 566 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 EEF1DP29692 281 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CHN2P52757 468 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CDH4P55283 916 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GK3PQ14409 553 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C5orf22Q49AR2 442 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ANKS3Q6ZW76 656 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ARPINQ7Z6K5 226 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RETREG3Q86VR2 466 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RHEBL1Q8TAI7 183 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GPR21Q99679 349 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TFB2MQ9H5Q4 396 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SCUBE2Q9NQ36 999 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 UBAP1Q9NZ09 502 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SUN2Q9UH99 717 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SARDHQ9UL12 918 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 OR1I1O60431 355 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LINC00032P0C843 101 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 COL6A1P12109 1028 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GPX3P22352 226 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 OR1D2P34982 312 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LHX8Q68G74 356 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LINGO4Q6UY18 593 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TICAM1Q8IUC6 712 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PIANPQ8IYJ0 282 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TMEM102Q8N9M5 508 aaPredicted RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC43A3Q8NBI5 491 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CD99L2Q8TCZ2 262 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PPP1R14BQ96C90 147 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CCDC68Q9H2F9 335 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ELAC1Q9H777 363 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 INIPQ9NRY2 104 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TAS2R13Q9NYV9 303 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CROTQ9UKG9 612 aa18.25■□□□□ 0.51
CHRFAM7A-202ENST00000397827 A0A0J9YYE9 177 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NR5A2O00482 541 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KDELR3O43731 214 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NDUFS3O75489 264 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ALDH1A1P00352 501 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RHOCP08134 193 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CORO1AP31146 461 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PSMD8P48556 350 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC7A2P52569 658 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GRM2Q14416 872 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PTPRNQ16849 979 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PSAPL1Q6NUJ1 521 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 EFHBQ8N7U6 833 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 WBP2Q969T9 261 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ESAMQ96AP7 390 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CNBD2Q96M20 576 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TTLL2Q9BWV7 592 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TDRD1Q9BXT4 1180 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 POPDC3Q9HBV1 291 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MRGBPQ9NV56 204 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DDX18Q9NVP1 670 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 INTS10Q9NVR2 710 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AP4B1Q9Y6B7 739 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TRIM43BA6NCK2 446 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ZNF840PA6NDX5 716 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 H7C4K7 107 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ARVCFO00192 962 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 FGF4P08620 206 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 HOXB8P17481 243 aaPredicted RBP18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CR2P20023 1033 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CYTH1Q15438 398 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 VPS26BQ4G0F5 336 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TMEM259Q4ZIN3 620 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms