RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 NFATC2Q13469 925 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 KRT81Q14533 505 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
RPA3-202ENST00000396682 SNAP47Q5SQN1 464 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 WDR74Q6RFH5 385 aaPredicted RBP13.16□□□□□ -0.3
RPA3-202ENST00000396682 TIPARPQ7Z3E1 657 aaKnown RBP13.16□□□□□ -0.3
RPA3-202ENST00000396682 LRRC49Q8IUZ0 686 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 NRSN1Q8IZ57 195 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 OR10G6Q8NH81 332 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
RPA3-202ENST00000396682 LRRN4Q8WUT4 740 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 AHCYL2Q96HN2 611 aaKnown RBP13.16□□□□□ -0.3
RPA3-202ENST00000396682 LYSMD1Q96S90 227 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 ZMYND15Q9H091 742 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 APMAPQ9HDC9 416 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 SARS2Q9NP81 518 aaKnown RBP13.16□□□□□ -0.3
RPA3-202ENST00000396682 VPS18Q9P253 973 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 ZNHIT2Q9UHR6 403 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
RPA3-202ENST00000396682 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 MATN3O15232 486 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 ASMTLO95671 621 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 HLA-DQB2P05538 268 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 EPHB1P54762 984 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 SRSF1Q07955 248 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPA3-202ENST00000396682 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
RPA3-202ENST00000396682 IYDQ6PHW0 289 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 CHST15Q7LFX5 561 aaPredicted RBP13.15□□□□□ -0.3
RPA3-202ENST00000396682 UNC5BQ8IZJ1 945 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 SLC45A3Q96JT2 553 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 TEFMQ96QE5 360 aaKnown RBP13.15□□□□□ -0.3
RPA3-202ENST00000396682 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
RPA3-202ENST00000396682 EPN3Q9H201 632 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 RBM22Q9NW64 420 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPA3-202ENST00000396682 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 IP6K2Q9UHH9 426 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 TUBD1Q9UJT1 453 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 KCNK6Q9Y257 313 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
RPA3-202ENST00000396682 ZNF891A8MT65 544 aaPredicted RBP13.14□□□□□ -0.31
RPA3-202ENST00000396682 CYP1A2P05177 515 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 MMP2P08253 660 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 ACP5P13686 325 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 CCR10P46092 362 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 SPINT3P49223 89 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 ZNF165P49910 485 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 NR1I3Q14994 352 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 SKIDA1Q1XH10 827 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 RAVER1Q8IY67 606 aaKnown RBP13.14□□□□□ -0.31
RPA3-202ENST00000396682 NLGN4XQ8N0W4 816 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 NLGN4YQ8NFZ3 816 aaPredicted RBP13.14□□□□□ -0.31
RPA3-202ENST00000396682 NCSTNQ92542 709 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 FATE1Q969F0 183 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 EID2BQ96D98 161 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 TSGA13Q96PP4 275 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 TBC1D10AQ9BXI6 508 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 GPN2Q9H9Y4 310 aaPredicted RBP13.14□□□□□ -0.31
RPA3-202ENST00000396682 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 FBXO8Q9NRD0 319 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 DNPEPQ9ULA0 475 aa13.14□□□□□ -0.31
RPA3-202ENST00000396682 TMEM184BQ9Y519 407 aaPredicted RBP13.14□□□□□ -0.31
RPA3-202ENST00000396682 A0A087X0T9 212 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 C1orf232A0A0U1RR37 186 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 SNX2O60749 519 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 DLGAP3O95886 979 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 FAM228BP0C875 321 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 F3P13726 295 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 CES1P23141 567 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 CCNCP24863 283 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 OAS2P29728 719 aaKnown RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 MAPK9P45984 424 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 PPM1FP49593 454 aaPredicted RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 EPHA4P54764 986 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 RPL26P61254 145 aaKnown RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 GBE1Q04446 702 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 CDC20Q12834 499 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 SLC10A2Q12908 348 aaPredicted RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 QPCTQ16769 361 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 ANKRD20A8PQ5CZ79 823 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 FAM182AQ5T1J6 154 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 TIGD7Q6NT04 549 aaPredicted RBP13.13□□□□□ -0.31
RPA3-202ENST00000396682 CEACAM20Q6UY09 585 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 LYSMD3Q7Z3D4 306 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
RPA3-202ENST00000396682 CATSPER2Q96P56 530 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms