RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PLEKHM1Q9Y4G2 1056 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 A8MU76 341 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 TMCO5BA8MYB1 307 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 MKRN2OSH3BPM6 223 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 DLGAP3O95886 979 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 F3P13726 295 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 CTPS1P17812 591 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 AMPD1P23109 780 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 STAT5AP42229 794 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 PIGHQ14442 188 aaPredicted RBP17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 IGFBP7Q16270 282 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 DEFB109BQ30KR1 87 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 SNAP47Q5SQN1 464 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 ALG1LQ6GMV1 187 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 TCTN3Q6NUS6 607 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 CYB5D1Q6P9G0 228 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 MARK2Q7KZI7 788 aaKnown RBP17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 TIPARPQ7Z3E1 657 aaKnown RBP17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 TP53INP2Q8IXH6 220 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 TEKT4Q8WW24 435 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 SCAMP4Q969E2 229 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 FATE1Q969F0 183 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 RIOK2Q9BVS4 552 aaKnown RBP17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 CD84Q9UIB8 345 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 MAN2B2Q9Y2E5 1009 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 NOTCH2Q04721 2471 aa17.35■□□□□ 0.37
EXOSC3-202ENST00000396521 LILRA5A6NI73 299 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 PRR19A6NJB7 356 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 GPR89AB7ZAQ6 455 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 DNAJC6O75061 913 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 GPR89BP0CG08 455 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 CD97P48960 835 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 CLCNKAP51800 687 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 MAXP61244 160 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 NFATC2Q13469 925 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 IL11RAQ14626 422 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 TIGD7Q6NT04 549 aaPredicted RBP17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 CHST15Q7LFX5 561 aaPredicted RBP17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 LYSMD1Q96S90 227 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 CTRCQ99895 268 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 NT5MQ9NPB1 228 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 TBC1D29Q9UFV1 150 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 KCND3Q9UK17 655 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 RPS6KL1Q9Y6S9 549 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 RELNP78509 3460 aa17.34■□□□□ 0.37
EXOSC3-202ENST00000396521 MN1Q10571 1320 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 TRBV23OR9-2A0A075B6M9 112 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 A6NCN8 305 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 INPP4BO15327 924 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 PDHA1P08559 390 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 OAS2P29728 719 aaKnown RBP17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 ITKQ08881 620 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 RBM43Q6ZSC3 357 aaKnown RBP17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 ZNF761Q86XN6 746 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 PHYKPLQ8IUZ5 450 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 TEX19Q8NA77 164 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 CCHCR1Q8TD31 782 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 SEC14L1Q92503 715 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 PSMG3-AS1Q96PY0 264 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 TRIM7Q9C029 511 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 CARD9Q9H257 536 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 ETNK2Q9NVF9 386 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 AIPL1Q9NZN9 384 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 CPNE7Q9UBL6 633 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 KCNMB2Q9Y691 235 aa17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 SPTAN1Q13813 2472 aaKnown RBP17.33■□□□□ 0.36
EXOSC3-202ENST00000396521 ATMINO43313 823 aaPredicted RBP17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 C9P02748 559 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 IL1R2P27930 398 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 PRKCIP41743 596 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 ZNF165P49910 485 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 ANKRD20A8PQ5CZ79 823 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 C16orf46Q6P387 395 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 C6orf15Q6UXA7 325 aaPredicted RBP17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 TRIM74Q86UV6 250 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 LURAP1LQ8IV03 231 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 CCDC13Q8IYE1 715 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 UNC5BQ8IZJ1 945 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 HSPH1Q92598 858 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 MIB2Q96AX9 1013 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 ZNF653Q96CK0 615 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 ULBP3Q9BZM4 244 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 FAM83DQ9H4H8 585 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 PKD2L2Q9NZM6 624 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 POLHQ9Y253 713 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 RP1L1Q8IWN7 2480 aaPredicted RBP17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 TEX15Q9BXT5 2789 aa17.32■□□□□ 0.36
EXOSC3-202ENST00000396521 MATN3O15232 486 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 NUAK1O60285 661 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 EML2O95834 649 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 MT-ND3P03897 115 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 RARAP10276 462 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 XRCC1P18887 633 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 SPINT3P49223 89 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 ASIC2Q16515 512 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 CCDC122Q5T0U0 273 aa17.31■□□□□ 0.36
EXOSC3-202ENST00000396521 HENMT1Q5T8I9 393 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms