RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ETV5P41161 510 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 MARCKSL1P49006 195 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 CLN3Q13286 438 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 PHF19Q5T6S3 580 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 HENMT1Q5T8I9 393 aaKnown RBP18.16■□□□□ 0.5
FXN-203ENST00000396366 BROXQ5VW32 411 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 ALS2CLQ60I27 953 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 SPOCD1Q6ZMY3 1216 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 JAMLQ86YT9 394 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 GALNT13Q8IUC8 556 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 GPR26Q8NDV2 337 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 CCHCR1Q8TD31 782 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 NUDT22Q9BRQ3 303 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 SLC25A51Q9H1U9 297 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 GLOD4Q9HC38 313 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 PKD2L2Q9NZM6 624 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 SSUH2Q9Y2M2 353 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 PCDHA13Q9Y5I0 950 aa18.16■□□□□ 0.5
FXN-203ENST00000396366 PMPCBO75439 489 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 LCA5LO95447 670 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 SLC4A1P02730 911 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 PYGLP06737 847 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 PTPN3P26045 913 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 CD68P34810 354 aaPredicted RBP18.15■□□□□ 0.5
FXN-203ENST00000396366 TMPRSS3P57727 454 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 EIF3IQ13347 325 aaKnown RBP18.15■□□□□ 0.5
FXN-203ENST00000396366 NR1D2Q14995 579 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 C16orf72Q14CZ0 275 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 PRKD1Q15139 912 aaPredicted RBP18.15■□□□□ 0.5
FXN-203ENST00000396366 TGIF1Q15583 401 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 TEX44Q53QW1 395 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 PCSK4Q6UW60 755 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 CHST15Q7LFX5 561 aaPredicted RBP18.15■□□□□ 0.5
FXN-203ENST00000396366 PIM3Q86V86 326 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 ZNF761Q86XN6 746 aaPredicted RBP18.15■□□□□ 0.5
FXN-203ENST00000396366 RAVER1Q8IY67 606 aaKnown RBP18.15■□□□□ 0.5
FXN-203ENST00000396366 ZFYVE1Q9HBF4 777 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 SPO11Q9Y5K1 396 aa18.15■□□□□ 0.5
FXN-203ENST00000396366 F5H423 210 aaPredicted RBP18.14■□□□□ 0.49
FXN-203ENST00000396366 AURKAO14965 403 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 CPNE6O95741 557 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 JMJD7P0C870 316 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 MPSTP25325 297 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 HADHBP55084 474 aaKnown RBP18.14■□□□□ 0.49
FXN-203ENST00000396366 CFHR1Q03591 330 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 CDK18Q07002 472 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 WASHC5Q12768 1159 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 BIRC2Q13490 618 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 MAP9Q49MG5 647 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 TMC3Q7Z5M5 1100 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 ZC3H18Q86VM9 953 aaKnown RBP18.14■□□□□ 0.49
FXN-203ENST00000396366 RCBTB1Q8NDN9 531 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 HAUS1Q96CS2 278 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 TEKT5Q96M29 485 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 WDR70Q9NW82 654 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 KCNK6Q9Y257 313 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 ZNF711Q9Y462 761 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 PCDHGA7Q9Y5G6 932 aa18.14■□□□□ 0.49
FXN-203ENST00000396366 PRAMEF33A0A0G2JMD5 474 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 IGHV5-10-1A0A0J9YXX1 117 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 RGSL1A5PLK6 1076 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 RCCD1A6NED2 376 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 ATXN7O15265 892 aaPredicted RBP18.13■□□□□ 0.49
FXN-203ENST00000396366 PSTPIP1O43586 416 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 PRAMEF10O60809 474 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 CCL4P13236 92 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 MLLT3P42568 568 aaPredicted RBP18.13■□□□□ 0.49
FXN-203ENST00000396366 NR2C2P49116 596 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 MAPK10P53779 464 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 SRSF6Q13247 344 aaKnown RBP18.13■□□□□ 0.49
FXN-203ENST00000396366 TFDP2Q14188 446 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 NOMO1Q15155 1222 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 SLC37A2Q8TED4 501 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 TFB1MQ8WVM0 346 aaKnown RBP18.13■□□□□ 0.49
FXN-203ENST00000396366 SLC39A7Q92504 469 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 KRT35Q92764 455 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 USP7Q93009 1102 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 SPATA16Q9BXB7 569 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 C10orf88Q9H8K7 445 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 MAGEE1Q9HCI5 957 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 TMEM9Q9P0T7 183 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 VPS18Q9P253 973 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 ATXN10Q9UBB4 475 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 TBC1D29Q9UFV1 150 aa18.13■□□□□ 0.49
FXN-203ENST00000396366 hCG_1818297A0A087WSY0 165 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 IGHV1OR21-1A0A087WYE8 117 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 A0A0A6YYK5 440 aaPredicted RBP18.12■□□□□ 0.49
FXN-203ENST00000396366 TEX51A0A1B0GUA7 166 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 EIF4E1BA6NMX2 242 aaKnown RBP18.12■□□□□ 0.49
FXN-203ENST00000396366 EFSO43281 561 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 ZRANB2O95218 330 aaKnown RBP eCLIP18.12■□□□□ 0.49
FXN-203ENST00000396366 ACP5P13686 325 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 ZNF8P17098 575 aaPredicted RBP18.12■□□□□ 0.49
FXN-203ENST00000396366 NFKB1P19838 968 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 CSF2RBP32927 897 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 GPR3P46089 330 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 UCNP55089 124 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 VAC14Q08AM6 782 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 LRP8Q14114 963 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms