RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CAP1Q01518 475 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SQLEQ14534 574 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TEAD4Q15561 434 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ATP13A5Q4VNC0 1218 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GPR158Q5T848 1215 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NET1Q7Z628 596 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KRT73Q86Y46 540 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZDHHC13Q8IUH4 622 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PGBD3Q8N328 593 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TMEM132CQ8N3T6 1108 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 N4BP2L2Q92802 583 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SCRN2Q96FV2 425 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SHDQ96IW2 340 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KLF6Q99612 283 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MGME1Q9BQP7 344 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HEPHQ9BQS7 1158 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 THUMPD3Q9BV44 507 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ADAM7Q9H2U9 754 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DUS2Q9NX74 493 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CFAP97Q9P2B7 532 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DOLKQ9UPQ8 538 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF451Q9Y4E5 1061 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LRRC72A6NJI9 287 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SNAP91O60641 907 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GNPDA1P46926 289 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GLRBP48167 497 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SLC7A9P82251 487 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HSPA14Q0VDF9 509 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CUL3Q13618 768 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PDCD2Q16342 344 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 WLSQ5T9L3 541 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ADHFE1Q8IWW8 467 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DENND1AQ8TEH3 1009 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KIAA1191Q96A73 305 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PHF21BQ96EK2 531 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 IL1RAPL1Q9NZN1 696 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 C3orf18Q9UK00 162 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PCDHGB3Q9Y5G1 929 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 EDDM13A0A1B0GTR0 161 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AIM2O14862 343 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KIAA0355O15063 1070 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ARHGEF15O94989 841 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CCNDBP1O95273 360 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SEMA3AQ14563 771 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DPY19L2P1Q6NXN4 242 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AADACL2Q6P093 401 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AGR3Q8TD06 166 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KCNV2Q8TDN2 545 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 APOL5Q9BWW9 433 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TM6SF2Q9BZW4 377 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ROGDIQ9GZN7 287 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 BRD9Q9H8M2 597 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PRKAG3Q9UGI9 489 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CHKBQ9Y259 395 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SHANK1Q9Y566 2161 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 C5orf58C9J3I9 102 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AZIN1O14977 448 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SPTLC1O15269 473 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MAP3K13O43283 966 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CDK14O94921 469 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 METTL18O95568 372 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PIK3CBP42338 1070 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TAS2R39P59534 338 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 RBBP7Q16576 425 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ARL13AQ5H913 290 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 COQ5Q5HYK3 327 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PIK3R6Q5UE93 754 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 STEAP4Q687X5 459 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GPR180Q86V85 440 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FIBINQ8TAL6 211 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DNAJC9Q8WXX5 260 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AP2M1Q96CW1 435 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NSMCE2Q96MF7 247 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF184Q99676 751 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SHCBP1LQ9BZQ2 653 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SUV39H2Q9H5I1 410 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FIS1Q9Y3D6 152 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AP4S1Q9Y587 144 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LOC100653049A0A140TA62 436 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 H7C0S8 307 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 WNT9AO14904 365 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PRMT3O60678 531 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 KRT34O76011 436 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HRH2P25021 359 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MC4RP32245 332 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 NEK3P51956 506 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CTBP1Q13363 440 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FASTKQ14296 549 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HTR3DQ70Z44 454 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LIMS2Q7Z4I7 341 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF280BQ86YH2 543 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TRAPPC5Q8IUR0 188 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GSTCDQ8NEC7 633 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 VPS33AQ96AX1 596 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DTNBP1Q96EV8 351 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TBATAQ96M53 351 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CROTQ9UKG9 612 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 COL4A5P29400 1685 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MGEA5O60502 916 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MAFKO60675 156 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms