RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MFSD6Q6ZSS7 791 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 LDB1Q86U70 411 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 SNX32Q86XE0 403 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 BEST3Q8N1M1 668 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 MCUQ8NE86 351 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 OR1J2Q8NGS2 313 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 KIF18AQ8NI77 898 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 CFAP57Q96MR6 1250 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 DACH2Q96NX9 599 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 GFM1Q96RP9 751 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 GPATCH1Q9BRR8 931 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 MMP27Q9H306 513 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 MAGIXQ9H6Y5 334 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 OR6C3Q9NZP0 311 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 LARSQ9P2J5 1176 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 ACSL5Q9ULC5 683 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 SQORQ9Y6N5 450 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZMYM2Q9UBW7 1377 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 TMEM272A0A1B0GTI8 110 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 KANSL1LA0AUZ9 987 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 KCNU1A8MYU2 1149 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 H0Y626 953 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 RECQL5O94762 991 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TOMM70O94826 608 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NDUFB8O95169 186 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TGDSO95455 350 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TNNT3P45378 269 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NPY4RP50391 375 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 PPP2R2BQ00005 443 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NEDD9Q14511 834 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 HYAL4Q2M3T9 481 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 CBWD6Q4V339 395 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 ATP13A5Q4VNC0 1218 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 DCAF6Q58WW2 860 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 CBWD3Q5JTY5 395 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 SLC10A5Q5PT55 438 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 C10orf25Q5T742 122 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 CST9LP1Q5W188 147 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 SHFQ7M4L6 423 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 ATG9AQ7Z3C6 839 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 RD3Q7Z3Z2 195 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 HAUS6Q7Z4H7 955 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 GGNQ86UU5 652 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NRROSQ86YC3 692 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 RASGEF1CQ8N431 466 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NEXN-AS1Q8NBZ9 246 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 OR10S1Q8NGN2 331 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 HM13Q8TCT9 377 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TAS1R2Q8TE23 839 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TRIB2Q92519 343 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 RND1Q92730 232 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 APBB2Q92870 758 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 MOAP1Q96BY2 351 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 COQ8BQ96D53 544 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 SIPA1Q96FS4 1042 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 VMP1Q96GC9 406 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NUDCD1Q96RS6 583 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 CRAMP1Q96RY5 1269 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 DDOQ99489 341 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 SEMA4CQ9C0C4 833 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 KCNK15Q9H427 330 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 SIRT3Q9NTG7 399 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 CHCHD3Q9NX63 227 aaKnown RBP5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TAS2R14Q9NYV8 317 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 UBA2Q9UBT2 640 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TSPYL4Q9UJ04 414 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 TINAGQ9UJW2 476 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 GTF3C4Q9UKN8 822 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 BTBD3Q9Y2F9 522 aa5.01□□□□□ -1.61
HMGB1P10-201ENST00000395823 NCANO14594 1321 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 A0A1W2PPM1 405 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 PRRG2O14669 202 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 HSPA12AO43301 675 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 EGFP01133 1207 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 TNFRSF1BP20333 461 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 DNASE1P24855 282 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 OAS2P29728 719 aaKnown RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 HOXC8P31273 242 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 APOBEC1P41238 236 aaKnown RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 ARSEP51690 589 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 POLGP54098 1239 aaPredicted RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZXDAP98168 799 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 SRSF1Q07955 248 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 RALGDSQ12967 914 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 GRIK2Q13002 908 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 SNAPC1Q16533 368 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 STRIP1Q5VSL9 837 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 DCAF12L2Q5VW00 463 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 DHRS7BQ6IAN0 325 aaPredicted RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 CAVIN1Q6NZI2 390 aaKnown RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 PAPD4Q6PIY7 484 aaKnown RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 PARM1Q6UWI2 310 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 CTU1Q7Z7A3 348 aaKnown RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZNF595Q8IYB9 648 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 AADATQ8N5Z0 425 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZNF713Q8N859 430 aaPredicted RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 OR2AK2Q8NG84 335 aa5□□□□□ -1.61
HMGB1P10-201ENST00000395823 SECISBP2LQ93073 1101 aaKnown RBP5□□□□□ -1.61
HMGB1P10-201ENST00000395823 CHFRQ96EP1 664 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms