RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SPACA3Q8IXA5 215 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 PTCD2Q8WV60 388 aaKnown RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 TMEM159Q96B96 161 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 HAUS1Q96CS2 278 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 TRIB3Q96RU7 358 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ZSCAN5AQ9BUG6 496 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 HEMGNQ9BXL5 484 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 DPH1Q9BZG8 443 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ASCL3Q9NQ33 180 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 FAM153AQ9UHL3 310 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ATXN7L1Q9ULK2 861 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 MYLKQ15746 1914 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 APC2O95996 2303 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 ITPR1Q14643 2758 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 LAMA5O15230 3695 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 EIF4E1BA6NMX2 242 aaKnown RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 H7C0C1 242 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 CASC3O15234 703 aaKnown RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 KLK10O43240 276 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 SLC25A14O95258 325 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 CPNE6O95741 557 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PTMAP06454 111 aaKnown RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PIRTP0C851 137 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 CTNNA2P26232 953 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 GPR3P46089 330 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 ATP5OP48047 213 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PDX1P52945 283 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 OR1D5P58170 312 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 TLE3Q04726 772 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PPP2R5EQ16537 467 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 CLPPQ16740 277 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PHF19Q5T6S3 580 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PDPK2PQ6A1A2 396 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 CHST15Q7LFX5 561 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 TMC3Q7Z5M5 1100 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 B3GNT8Q7Z7M8 397 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 C17orf82Q86X59 251 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 JAMLQ86YT9 394 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 HTR3CQ8WXA8 447 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 CMKLR1Q99788 373 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 STN1Q9H668 368 aaKnown RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.63□□□□□ -0.23
CXCL12-205ENST00000395794 TRHDEQ9UKU6 1024 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PLEKHM1Q9Y4G2 1056 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
CXCL12-205ENST00000395794 LRP4O75096 1905 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 ACACAQ13085 2346 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 MACROD2A1Z1Q3 448 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 CCDC66A2RUB6 948 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 GPR89AB7ZAQ6 455 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 STK10O94804 968 aaKnown RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 EPOP01588 193 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 GPR89BP0CG08 455 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 SLC2A4P14672 509 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 NFKB1P19838 968 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 CTNNA1P35221 906 aaKnown RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 UGT1A5P35504 534 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 MARCKSL1P49006 195 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 WNT3AP56704 352 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 RWDD2BP57060 319 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 TMPRSS3P57727 454 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 DCDC1P59894 354 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 B4GALNT1Q00973 533 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 ADCY2Q08462 1091 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 WASHC5Q12768 1159 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 XRCC4Q13426 336 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 FAM182AQ5T1J6 154 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 BBS12Q6ZW61 710 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 USP53Q70EK8 1073 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 ZNF438Q7Z4V0 828 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 NAGSQ8N159 534 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 TRAM1L1Q8N609 369 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 KRT35Q92764 455 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 AHCYL2Q96HN2 611 aaKnown RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 FCRL3Q96P31 734 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 QKIQ96PU8 341 aaKnown RBP eCLIP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 FCRL5Q96RD9 977 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 WDR24Q96S15 920 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 SLC38A3Q99624 504 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 BAG1Q99933 345 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 FSD1LQ9BXM9 530 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 CARD9Q9H257 536 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 TRIM39Q9HCM9 518 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 KCNK4Q9NYG8 393 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 RSPH14Q9UHP6 348 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 PRKAB1Q9Y478 270 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 LOXL2Q9Y4K0 774 aa13.62□□□□□ -0.23
CXCL12-205ENST00000395794 URB1O60287 2271 aaKnown RBP13.62□□□□□ -0.23
CXCL12-205ENST00000395794 ADAMTS20P59510 1910 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms