RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SIK3Q9Y2K2 1263 aa15.68■□□□□ 0.1
SNCA-205ENST00000394991 PPIL1Q9Y3C6 166 aa15.68■□□□□ 0.1
SNCA-205ENST00000394991 PCDHB3Q9Y5E6 796 aa15.68■□□□□ 0.1
SNCA-205ENST00000394991 CDC14CA4D256 554 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 KATNA1O75449 491 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 DNAJB5O75953 348 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 ATP1A1P05023 1023 aaKnown RBP15.67■□□□□ 0.1
SNCA-205ENST00000394991 PDHA1P08559 390 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 PSMA2P25787 234 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 NFKBIAP25963 317 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 HSPA9P38646 679 aaKnown RBP15.67■□□□□ 0.1
SNCA-205ENST00000394991 PTSQ03393 145 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 FOXM1Q08050 763 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 ZNF765Q7L2R6 523 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 CHST15Q7LFX5 561 aaPredicted RBP15.67■□□□□ 0.1
SNCA-205ENST00000394991 MCOLN2Q8IZK6 566 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 LZTR1Q8N653 840 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 CPT1CQ8TCG5 803 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 SH3KBP1Q96B97 665 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 TRIM55Q9BYV6 548 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 STN1Q9H668 368 aaKnown RBP15.67■□□□□ 0.1
SNCA-205ENST00000394991 OGFRQ9NZT2 677 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 CWC15Q9P013 229 aaKnown RBP15.67■□□□□ 0.1
SNCA-205ENST00000394991 ZNHIT2Q9UHR6 403 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 LRBAP50851 2863 aa15.67■□□□□ 0.1
SNCA-205ENST00000394991 A1L4Q6 167 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 TTLL8A6PVC2 850 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 KIAA0754O94854 1291 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 ASMTLO95671 621 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 C9P02748 559 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 ACP5P13686 325 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 SH3BP2P78314 561 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 ARMC12Q5T9G4 340 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 SLC9B2Q86UD5 537 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 EFCAB3Q8N7B9 438 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 AGPAT1Q99943 283 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 HERPUD2Q9BSE4 406 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 RIOK2Q9BVS4 552 aaKnown RBP15.66■□□□□ 0.1
SNCA-205ENST00000394991 TRIM7Q9C029 511 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 ETNK2Q9NVF9 386 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 TAS2R14Q9NYV8 317 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 VPS18Q9P253 973 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 RCOR3Q9P2K3 495 aaPredicted RBP15.66■□□□□ 0.1
SNCA-205ENST00000394991 CPNE7Q9UBL6 633 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 CNOT8Q9UFF9 292 aaKnown RBP15.66■□□□□ 0.1
SNCA-205ENST00000394991 DACH1Q9UI36 760 aa15.66■□□□□ 0.1
SNCA-205ENST00000394991 CNOT6Q9ULM6 557 aaKnown RBP15.66■□□□□ 0.1
SNCA-205ENST00000394991 CRYBG3Q68DQ2 2970 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 LILRA5A6NI73 299 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 ENO4A6NNW6 628 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
SNCA-205ENST00000394991 FZD6O60353 706 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 MAFKO60675 156 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 SNX2O60749 519 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 F3P13726 295 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 MIPP30301 263 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 NOP2P46087 812 aaKnown RBP15.65■□□□□ 0.1
SNCA-205ENST00000394991 STC1P52823 247 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 UBE2IP63279 158 aaKnown RBP15.65■□□□□ 0.1
SNCA-205ENST00000394991 MAMLD1Q13495 774 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 IHHQ14623 411 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 KRT31Q15323 416 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 ZNF787Q6DD87 383 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 ACAD10Q6JQN1 1059 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 NLRP8Q86W28 1048 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 PLXDC1Q8IUK5 500 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 APLFQ8IW19 511 aaPredicted RBP15.65■□□□□ 0.1
SNCA-205ENST00000394991 STAMBPL1Q96FJ0 436 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 WDR24Q96S15 920 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.65■□□□□ 0.1
SNCA-205ENST00000394991 TWSG1Q9GZX9 223 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 EPB41L1Q9H4G0 881 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 CELSR2Q9HCU4 2923 aa15.65■□□□□ 0.1
SNCA-205ENST00000394991 KIR2DS5A0A0G2JLQ3 304 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 A0A0G2JNG1 304 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 GOLGA6L3A6NEY3 463 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 KIR2DS3K7RE56 304 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 CREG1O75629 220 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 NDUFA10O95299 355 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 PYGLP06737 847 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 DESP17661 470 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 AMPD1P23109 780 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 HCAR3P49019 387 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 SEPHS1P49903 392 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 SEMA5AQ13591 1074 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 DNASE1L3Q13609 305 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 KIR2DS5Q14953 304 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 SYCP1Q15431 976 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 NADK2Q4G0N4 442 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 RALGPS1Q5JS13 557 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 LYSMD3Q7Z3D4 306 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 EXD1Q8NHP7 514 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 CT55Q8WUE5 264 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 ELMO2Q96JJ3 720 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 PLEKHG4BQ96PX9 1271 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 OR6C1Q96RD1 312 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 RUFY1Q96T51 708 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 KCND3Q9UK17 655 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 MAP4K5Q9Y4K4 846 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms