RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 KRT14P02533 472 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 CASQ1P31415 396 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 PAFAH1B1P43034 410 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 FNTAP49354 379 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 ETF1P62495 437 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 BASP1P80723 227 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 TRIP13Q15645 432 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 DEFB133Q30KQ1 61 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 N4BP2L1Q5TBK1 243 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 KCTD16Q68DU8 428 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 LVRNQ6Q4G3 990 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 CREG2Q8IUH2 290 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 GLYATL1Q969I3 302 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 SUDS3Q9H7L9 328 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 RNF14Q9UBS8 474 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 SUFUQ9UMX1 484 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 APOBEC2Q9Y235 224 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 DCHS1Q96JQ0 3298 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 GLYATL1P3A0A0U1RQE8 302 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 FUCA1P04066 466 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 HADHAP40939 763 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 GNPDA1P46926 289 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 PTPRCAPQ14761 206 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 POU6F1Q14863 301 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 FAM151BQ6UXP7 276 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 TAF8Q7Z7C8 310 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 GLMNQ92990 594 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 SCARF2Q96GP6 870 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 C19orf43Q9BQ61 176 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 TMEM168Q9H0V1 697 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 TRIM39Q9HCM9 518 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 EIF2B3Q9NR50 452 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 PIH1D1Q9NWS0 290 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 TRNAU1APQ9NX07 287 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 VPS18Q9P253 973 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 GPSM3Q9Y4H4 160 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 KCTD3Q9Y597 815 aa18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 OAS3Q9Y6K5 1087 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 COL5A1P20908 1838 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-204ENST00000393546 LRP4O75096 1905 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 LDB2O43679 373 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 CELA2BP08218 269 aaPredicted RBP18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 CKMT2P17540 419 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 DAB2P98082 770 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 CDK16Q00536 496 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 GPS1Q13098 491 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 LAMB3Q13751 1172 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 ITGA9Q13797 1035 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 SEPT6Q14141 434 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 TCEA2Q15560 299 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 CHRNA6Q15825 494 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 PROX2Q3B8N5 592 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 ATP13A5Q4VNC0 1218 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 ZCCHC8Q6NZY4 707 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 MARK2Q7KZI7 788 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 PHYKPLQ8IUZ5 450 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 FAM181AQ8N9Y4 354 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 VPS35Q96QK1 796 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 RMI1Q9H9A7 625 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 CASS4Q9NQ75 786 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 EVA1BQ9NVM1 165 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 NCKIPSDQ9NZQ3 722 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 ZNHIT2Q9UHR6 403 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 SPTBN2O15020 2390 aa18.83■□□□□ 0.6
PDLIM7-204ENST00000393546 SCN8AQ9UQD0 1980 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 AP3B1O00203 1094 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A9O60656 530 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 FTH1P19P0C7X4 201 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A6P19224 532 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A1P22309 533 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A4P22310 534 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A3P35503 534 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A5P35504 534 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 GRIA1P42261 906 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 VPS41P49754 854 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 DUSP3P51452 185 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 TMPRSS15P98073 1019 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 ILF3Q12906 894 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 CERCAMQ5T4B2 595 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 SYT10Q6XYQ8 523 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 GALNT13Q8IUC8 556 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 OR13C4Q8NGS5 318 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 GDAP1Q8TB36 358 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 ZNF398Q8TD17 642 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 GPBAR1Q8TDU6 330 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 STYXQ8WUJ0 223 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 PTCD2Q8WV60 388 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 APOLD1Q96LR9 279 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 OR2M4Q96R27 311 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 GSDMCQ9BYG8 508 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A7Q9HAW7 530 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A10Q9HAW8 530 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 UGT1A8Q9HAW9 530 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 ARFGAP3Q9NP61 516 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 FKBPLQ9UIM3 349 aa18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 GOLGA4Q13439 2230 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-204ENST00000393546 FANCGO15287 622 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms