RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF195O14628 629 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 TGDSO95455 350 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 HSPA4LO95757 839 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 SKIV2L2P42285 1042 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 CTC1Q2NKJ3 1217 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 CMPK2Q5EBM0 449 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 FAM45BPQ6NSW5 357 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 RTL10Q7L3V2 364 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 CLNKQ7Z7G1 428 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 PIWIL2Q8TC59 973 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 FAM45AQ8TCE6 357 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 SMARCD2Q92925 531 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 PEX13Q92968 403 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ABHD8Q96I13 439 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 KXD1Q9BQD3 176 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 MRPL46Q9H2W6 279 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 SFXN1Q9H9B4 322 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 HPS4Q9NQG7 708 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ARL8BQ9NVJ2 186 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ZFP69BQ9UJL9 534 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 SARDHQ9UL12 918 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 WASF2Q9Y6W5 498 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 VCANP13611 3396 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 A8MUI8 341 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 SIX3O95343 332 aaPredicted RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 CD1DP15813 335 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ZNF37AP17032 561 aaPredicted RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 OGNP20774 298 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 ALDH18A1P54886 795 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 PDAP1Q13442 181 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 UBAP2LQ14157 1087 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 DBN1Q16643 649 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 PDE12Q6L8Q7 609 aaKnown RBP14.88□□□□□ -0.03
MKS1-202ENST00000393119 SERPINA9Q86WD7 417 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ESAMQ96AP7 390 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 SKA1Q96BD8 255 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 SAMD11Q96NU1 681 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 GDF15Q99988 308 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ASB8Q9H765 288 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 BRD9Q9H8M2 597 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 B4GALT6Q9UBX8 382 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 MSRAQ9UJ68 235 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 RIMKLBQ9ULI2 386 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 ITM2BQ9Y287 266 aa14.88□□□□□ -0.03
MKS1-202ENST00000393119 GOLGA8QA0A0J9YX86 632 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 GOLGA8OA6NCC3 632 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CAPN8A6NHC0 703 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 NCF1BA6NI72 391 aaPredicted RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 A8MT66 165 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 NCF1CA8MVU1 366 aaPredicted RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 GOLGA8NF8WBI6 632 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 UBXN8O00124 270 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CDC7O00311 574 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 NCF1P14598 390 aaPredicted RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 PSMA3P25788 255 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CPA2P48052 419 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CSNK1DP48730 415 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 ZBTB16Q05516 673 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 FAM83EQ2M2I3 478 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 SLC9B1Q4ZJI4 515 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 LIPMQ5VYY2 423 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 VITQ6UXI7 678 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 KIAA0907Q7Z7F0 614 aaPredicted RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 TREML1Q86YW5 311 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 WDR75Q8IWA0 830 aaKnown RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 ECHDC3Q96DC8 303 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 RILPQ96NA2 401 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 MYADMQ96S97 322 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 WDR55Q9H6Y2 383 aaPredicted RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 MARK1Q9P0L2 795 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 FCHO1O14526 889 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 MTX2O75431 263 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 IL1BP01584 269 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 FESP07332 822 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 COL6A2P12110 1019 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 GNAZP19086 355 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CHRM3P20309 590 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CDH13P55290 713 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 TUBB3Q13509 450 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 LAMB3Q13751 1172 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 TRIM67Q6ZTA4 783 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 AHI1Q8N157 1196 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 EEF1AKMT1Q8WVE0 214 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 SCAMP4Q969E2 229 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 CHFRQ96EP1 664 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 MRPL57Q9BQC6 102 aaKnown RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 FBRSL1Q9HCM7 1045 aaKnown RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 G3BP2Q9UN86 482 aaKnown RBP14.87□□□□□ -0.03
MKS1-202ENST00000393119 SLC30A1Q9Y6M5 507 aa14.87□□□□□ -0.03
MKS1-202ENST00000393119 NEMP1O14524 444 aa14.86□□□□□ -0.03
MKS1-202ENST00000393119 SOCS5O75159 536 aa14.86□□□□□ -0.03
MKS1-202ENST00000393119 POP4O95707 220 aaKnown RBP14.86□□□□□ -0.03
MKS1-202ENST00000393119 IDH3AP50213 366 aa14.86□□□□□ -0.03
MKS1-202ENST00000393119 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
MKS1-202ENST00000393119 ZNF648Q5T619 568 aaPredicted RBP14.86□□□□□ -0.03
MKS1-202ENST00000393119 AGAP9Q5VTM2 703 aa14.86□□□□□ -0.03
MKS1-202ENST00000393119 GDPD4Q6W3E5 623 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms