RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 HCAR2Q8TDS4 363 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 DERL2Q9GZP9 239 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 ASB8Q9H765 288 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 HPS4Q9NQG7 708 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 DEC1Q9P2X7 70 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 IL36AQ9UHA7 158 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 PLXNB3Q9ULL4 1909 aa11.38□□□□□ -0.59
SMARCAL1-203ENST00000392128 CCDC85CA6NKD9 419 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 AGAP14A8MT82 685 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 F8W8V4 182 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PRMT5O14744 637 aaPredicted RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 GPR39O43194 453 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 LEFTY1O75610 366 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 DNAJC8O75937 253 aaPredicted RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 IPO13O94829 963 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SP100P23497 879 aaPredicted RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SERPINB3P29508 390 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SLC6A11P48066 632 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 HK2P52789 917 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ST8SIA6P61647 398 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 EIF4HQ15056 248 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PAQR3Q6TCH7 311 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PIWIL4Q7Z3Z4 852 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SERPINA9Q86WD7 417 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SLC22A9Q8IVM8 553 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PTERQ96BW5 349 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 SGF29Q96ES7 293 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 GPR21Q99679 349 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 POMKQ9H5K3 350 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 TFB2MQ9H5Q4 396 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ALG9Q9H6U8 611 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PNPOQ9NVS9 261 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NCKIPSDQ9NZQ3 722 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 B4GALT6Q9UBX8 382 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 RAP2CQ9Y3L5 183 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NUMBLQ9Y6R0 609 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 MYO9BQ13459 2157 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 DENND4AQ7Z401 1863 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 A8MT66 165 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 A8MX80 341 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PRRT4C9JH25 899 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF195O14628 629 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZBTB14O43829 449 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NIPSNAP2O75323 286 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 CTSLP07711 333 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 CYP2A6P11509 494 aaPredicted RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF30P17039 623 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF7P17097 686 aaPredicted RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NFKBIAP25963 317 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ACRV1P26436 265 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 BMP8BP34820 402 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ATP6V0D1P61421 351 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NFKB2Q00653 900 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 CHRNA6Q15825 494 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 UGT3A1Q6NUS8 523 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 RBFAQ8N0V3 343 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NKAPQ8N5F7 415 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF781Q8N8C0 355 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 GPR26Q8NDV2 337 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 NXPE3Q969Y0 559 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PLEKHG4BQ96PX9 1271 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 ILKAPQ9H0C8 392 aaPredicted RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 CDH19Q9H159 772 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 DNAJC28Q9NX36 388 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 TRMT6Q9UJA5 497 aaKnown RBP11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 PLA2G4CQ9UP65 541 aa11.37□□□□□ -0.59
SMARCAL1-203ENST00000392128 CCDC189A1A4V9 331 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 H3BMM5 538 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ATP5HO75947 161 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 UNC5CO95185 931 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 C1SP09871 688 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 LIG3P49916 1009 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 NCALDP61601 193 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZBTB16Q05516 673 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 MESP2Q0VG99 397 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 PRKAA1Q13131 559 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ADAM15Q13444 863 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF805Q5CZA5 627 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ARL13AQ5H913 290 aaPredicted RBP11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 ATAT1Q5SQI0 421 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 PHTF2Q8N3S3 785 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CPA6Q8N4T0 437 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CD200R1Q8TD46 325 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 KIAA1191Q96A73 305 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 PBXIP1Q96AQ6 731 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 FAM136AQ96C01 138 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CNDP1Q96KN2 507 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 SAR1AQ9NR31 198 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 TXLNGQ9NUQ3 528 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms