RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 NGFP01138 241 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 RAF1P04049 648 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 CHRM4P08173 479 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC2A4P14672 509 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZNF23P17027 643 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 ITGA3P26006 1051 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 HNF4AP41235 474 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 TM4SF4P48230 202 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 METAP2P50579 478 aaKnown RBP eCLIP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 BLKP51451 505 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 PLIN5Q00G26 463 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 GRIK3Q13003 919 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 GTDC1Q4AE62 458 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 COBLL1Q53SF7 1204 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SEL1L3Q68CR1 1132 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 HIST2H2BDQ6DRA6 164 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 LIN54Q6MZP7 749 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 FBXO46Q6PJ61 603 aaPredicted RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 IGFL3Q6UXB1 125 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZNF704Q6ZNC4 412 aaPredicted RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC35F3Q8IY50 421 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SYTL1Q8IYJ3 562 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 CPXM2Q8N436 756 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZNF843Q8N446 348 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 BEST2Q8NFU1 509 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 TSR2Q969E8 191 aaKnown RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 FBXL8Q96CD0 374 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZSCAN31Q96LW9 406 aaPredicted RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 SH3GL2Q99962 352 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 LMAN2LQ9H0V9 348 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 NYAP2Q9P242 653 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 CTNNAL1Q9UBT7 734 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 LRWD1Q9UFC0 647 aa1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 FBXO9Q9UK97 447 aaPredicted RBP1.14□□□□□ -2.23
RNU6-239P-201ENST00000390990 MEX3AA1L020 520 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 H0Y3Z8 333 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 BCAT2O15382 392 aaPredicted RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 CEP104O60308 925 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 SYNCRIPO60506 623 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 TRMUO75648 421 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 KRT38O76015 456 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 DDX5P17844 614 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 GNAZP19086 355 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 ABCB4P21439 1286 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 NKX2-1P43699 371 aaPredicted RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 RBM5P52756 815 aaKnown RBP eCLIP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 KCNJ10P78508 379 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 HLTFQ14527 1009 aaKnown RBP eCLIP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 NECTIN1Q15223 517 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 SMAD1Q15797 465 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 METTL2BQ6P1Q9 378 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 GGT6Q6P531 493 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 C17orf99Q6UX52 265 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 LINGO2Q7L985 606 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 MAP7D3Q8IWC1 876 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 CCDC117Q8IWD4 279 aaPredicted RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 SPPL3Q8TCT6 385 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 ORAI1Q96D31 301 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 GRAMD2BQ96HH9 432 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 METTL2AQ96IZ6 378 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 SIN3AQ96ST3 1273 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 RTP3Q9BQQ7 232 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 RPP25Q9BUL9 199 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 NDST4Q9H3R1 872 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 GPR108Q9NPR9 543 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 TCP11L1Q9NUJ3 509 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 ANAPC11Q9NYG5 84 aa1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 LIMA1Q9UHB6 759 aaKnown RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 TTC7AQ9ULT0 858 aaPredicted RBP1.13□□□□□ -2.23
RNU6-239P-201ENST00000390990 IGHV4-4A0A075B6R2 117 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 GOLGA6L3A6NEY3 463 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 SH2D7A6NKC9 451 aaPredicted RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 PDE9AO76083 593 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 IGHV3-13P01766 116 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 KRT6AP02538 564 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 KRT6BP04259 564 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 ACADMP11310 421 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 LIFP15018 202 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 ANXA7P20073 488 aaKnown RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 UGT1A4P22310 534 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 SHMT1P34896 483 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 KRT6CP48668 564 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 HNRNPKP61978 463 aaKnown RBP eCLIP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 YWHAZP63104 245 aaKnown RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 COG7P83436 770 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 GOLGA8FQ08AF8 430 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 ELAVL2Q12926 359 aaKnown RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 ACVR2BQ13705 512 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 CBWD5Q5RIA9 395 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 IL27RAQ6UWB1 636 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 PLXDC2Q6UX71 529 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 BEST3Q8N1M1 668 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZBTB2Q8N680 514 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 PRSS33Q8NF86 280 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 RAB40AQ8WXH6 277 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 RBM17Q96I25 401 aaKnown RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 MAGEE1Q9HCI5 957 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 HINT3Q9NQE9 182 aaKnown RBP1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 DACT1Q9NYF0 836 aa1.12□□□□□ -2.23
RNU6-239P-201ENST00000390990 CARD8Q9Y2G2 431 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms