RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 GALK2Q01415 458 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 UGT3A2Q3SY77 523 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF484Q5JVG2 852 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 FAM160B1Q5W0V3 765 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC41A1Q8IVJ1 513 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 SVOPQ8N4V2 548 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 AFAP1L2Q8N4X5 818 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 NETO2Q8NC67 525 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 OR6F1Q8NGZ6 308 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 KHSRPQ92945 711 aaKnown RBP eCLIP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 TRIM8Q9BZR9 551 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 TOR3AQ9H497 397 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 RHOJQ9H4E5 214 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 LTB4R2Q9NPC1 389 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 PAK1IP1Q9NWT1 392 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 BFARQ9NZS9 450 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZSCAN5BA6NJL1 495 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZBTB42B2RXF5 422 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 TBX1O43435 398 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 MSCO60682 206 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 MAFO75444 373 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 MFN2O95140 757 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ALDOCP09972 364 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 CAPN3P20807 821 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 AGXTP21549 392 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 GSK3BP49841 420 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 EMX1Q04741 257 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF460Q14592 562 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 CDK10Q15131 360 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 SPATS1Q496A3 300 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 FAM219BQ5XKK7 198 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 PTRH1Q86Y79 214 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF567Q8N184 647 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 BPIFB1Q8TDL5 484 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 LRRC58Q96CX6 371 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 YIPF6Q96EC8 236 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 AURKBQ96GD4 344 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF300Q96RE9 604 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 KCTD15Q96SI1 283 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 SEPHS2Q99611 448 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZBED2Q9BTP6 218 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 MUC13Q9H3R2 512 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 GTF2IRD1Q9UHL9 959 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF221Q9UK13 617 aa14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 MAGED1Q9Y5V3 778 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-201ENST00000389386 ATP6AP2A0A1C7CYW4 349 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 PTGES3LE9PB15 166 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 DAB1O75553 588 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 ATP6AP2O75787 350 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 SOAT2O75908 522 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 BMP1P13497 986 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CHRM3P20309 590 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 ATP5F1P24539 256 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CD47Q08722 323 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 C19orf57Q0VDD7 668 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 KCTD2Q14681 263 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 AGAP6Q5VW22 663 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 TTC23Q5W5X9 447 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CCSAPQ6IQ19 270 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 ZCCHC8Q6NZY4 707 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 DPH6Q7L8W6 267 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC26A9Q7LBE3 791 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 PRSS48Q7RTY5 328 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CUZD1Q86UP6 607 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 IFNEQ86WN2 208 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CCDC103Q8IW40 242 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 IL17RDQ8NFM7 739 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 BRI3BPQ8WY22 251 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 MS4A4AQ96JQ5 239 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 AGAP4Q96P64 663 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 MINDY3Q9H8M7 445 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CCDC177Q9NQR7 707 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 FAM118AQ9NWS6 357 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 SEPT10Q9P0V9 454 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 SAGE2PA6NJ88 616 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 EVPLLA8MZ36 301 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 PDHXO00330 501 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 TEX28O15482 410 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 PRKCBP05771 671 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 HOXC6P09630 235 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 TXNP10599 105 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 IFRD2Q12894 506 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 SNAP47Q5SQN1 464 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 ATAD3CQ5T2N8 411 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 RPS27LQ71UM5 84 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 RIMKLAQ8IXN7 391 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 SIMC1Q8NDZ2 872 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 TMEM125Q96AQ2 219 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 BIRC7Q96CA5 298 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 MRM3Q9HC36 420 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 MAGED2Q9UNF1 606 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 MAU2Q9Y6X3 613 aa14.59□□□□□ -0.07
VPS9D1-201ENST00000389386 CILPO75339 1184 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 KRT6AP02538 564 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 KRT6BP04259 564 aa14.58□□□□□ -0.07
VPS9D1-201ENST00000389386 NCS1P62166 190 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms