RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 PHF21AQ96BD5 680 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 SMOXQ9NWM0 555 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TUBA8Q9NY65 449 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 GNPTGQ9UJJ9 305 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TNPO3Q9Y5L0 923 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 KLRG2A4D1S0 409 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 C9IYK1 514 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 ELK4P28324 431 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 GJA9P57773 515 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 ATP6V0D1P61421 351 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 RHOAP61586 193 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 CLDN10P78369 228 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 INTS11Q5TA45 600 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 PIM3Q86V86 326 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 GATAD2AQ86YP4 633 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 SIX5Q8N196 739 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 MZB1Q8WU39 189 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 GPR21Q99679 349 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 PTBP2Q9UKA9 531 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 RGS20O76081 388 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZNF7P17097 686 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 IMPDH1P20839 514 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 IL12RB1P42701 662 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 RFX4Q33E94 735 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 RNF219Q5W0B1 726 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TAC4Q86UU9 113 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 FAM9CQ8IZT9 166 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TMEM86AQ8N2M4 240 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TSSK3Q96PN8 268 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 FBXW11Q9UKB1 542 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TMCC3Q9ULS5 477 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCL15-CCL14A0A0B4J2E2 113 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 MYBPHLA2RUH7 354 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ADM5C9JUS6 153 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 CLPXO76031 633 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCNCP24863 283 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 MADCAM1Q13477 382 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 CCL15Q16663 113 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TYW3Q6IPR3 259 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ENKURQ8TC29 256 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 SPPL2BQ8TCT7 592 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 GAB3Q8WWW8 586 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TMBIM1Q969X1 311 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 MUS81Q96NY9 551 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TEX12Q9BXU0 123 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 PADI4Q9UM07 663 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 CACNA1SQ13698 1873 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ELOVL7A1L3X0 281 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 RGS10O43665 173 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 FGD3Q5JSP0 725 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 SH3KBP1Q96B97 665 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 KCNA7Q96RP8 456 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 WDR83Q9BRX9 315 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 INTS10Q9NVR2 710 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ACTR3BQ9P1U1 418 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 VPS28Q9UK41 221 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 H3BN98 237 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 SCAMP3O14828 347 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 GPR182O15218 404 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 SERPIND1P05546 499 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 AQP1P29972 269 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 RRM2P31350 389 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 FMO3P31513 532 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 KRT20P35900 424 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 CHI3L1P36222 383 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 DAOAP59103 153 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 LILRA4P59901 499 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 PIGFQ07326 219 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 KIAA0930Q6ICG6 404 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 LBX2Q6XYB7 198 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ZYG11BQ9C0D3 744 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 AMBNQ9NP70 447 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 ADPRHL2Q9NX46 363 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TJP1Q07157 1748 aa13.07□□□□□ -0.32
TRAPPC9-201ENST00000389328 TTC24A2A3L6 582 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 TNFRSF21O75509 655 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 EPN2O95208 641 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 AXLP30530 894 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 SULT2A1Q06520 285 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 LAPTM5Q13571 262 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 TTC30BQ8N4P2 665 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 KBTBD8Q8NFY9 601 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 MUC13Q9H3R2 512 aa13.06□□□□□ -0.32
TRAPPC9-201ENST00000389328 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms