RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 NCF1CA8MVU1 366 aaPredicted RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 NPHS1O60500 1241 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 NIPSNAP2O75323 286 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 CRTAMO95727 393 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 CKMP06732 381 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 NCF1P14598 390 aaPredicted RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 MC4RP32245 332 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 NUDT2P50583 147 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 DNAJB13P59910 316 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 CDH18Q13634 790 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 TCEAL8Q8IYN2 117 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 GPR150Q8NGU9 434 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 LPGAT1Q92604 370 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 STMN2Q93045 179 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 ALG14Q96F25 216 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 RPL10LQ96L21 214 aaKnown RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 TTC1Q99614 292 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 AARSD1Q9BTE6 412 aaKnown RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 RPL26L1Q9UNX3 145 aaKnown RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 A0A1W2PRU2 124 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 STX16-NPEPL1H3BU86 382 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 RBP1P09455 135 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 DNAJB1P25685 340 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 FOXA1P55317 472 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 ACTR3P61158 418 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 ASPHQ12797 758 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 PDAP1Q13442 181 aaKnown RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 TAF1AQ15573 450 aaPredicted RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 PTPRNQ16849 979 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 UNC50Q53HI1 259 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 ACAD11Q709F0 780 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 GALNT7Q86SF2 657 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 DDX53Q86TM3 631 aaKnown RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 ARHGAP24Q8N264 748 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 DDI1Q8WTU0 396 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 CNDP1Q96KN2 507 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 C3orf30Q96M34 536 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 BIRC8Q96P09 236 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 KCNA7Q96RP8 456 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 GPR21Q99679 349 aa17.1■□□□□ 0.33
PDX1-201ENST00000381033 FBRSL1Q9HCM7 1045 aaKnown RBP17.1■□□□□ 0.33
PDX1-201ENST00000381033 EYSQ5T1H1 3165 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 SRP72O76094 671 aaKnown RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 RHOBTB1O94844 696 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 LUC7L3O95232 432 aaKnown RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 RHOAP61586 193 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 SH3BP2P78314 561 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 TBL3Q12788 808 aaKnown RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 TYSND1Q2T9J0 566 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 ZNF678Q5SXM1 525 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 METTL21CQ5VZV1 264 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 NCEH1Q6PIU2 408 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 PTGR2Q8N8N7 351 aaPredicted RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 SLC22A17Q8WUG5 538 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 RCN3Q96D15 328 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 TNKS2Q9H2K2 1166 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 ZNF385DQ9H6B1 395 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 HCFC1R1Q9NWW0 138 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 NMRK1Q9NWW6 199 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 ATXN10Q9UBB4 475 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 OBSL1O75147 1896 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 C2orf81A6NN90 581 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 CDC7O00311 574 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 PARNO95453 639 aaKnown RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 TAF11Q15544 211 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 ZRANB3Q5FWF4 1079 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 NET1Q7Z628 596 aaPredicted RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 SIDT2Q8NBJ9 832 aaKnown RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 ZNF784Q8NCA9 323 aaPredicted RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 HMGCLL1Q8TB92 370 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 MYLIPQ8WY64 445 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 SLC45A3Q96JT2 553 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
PDX1-201ENST00000381033 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
PDX1-201ENST00000381033 KDM1AO60341 852 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 FGF18O76093 207 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 IMPDH1P20839 514 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 LPOP22079 712 aaPredicted RBP17.08■□□□□ 0.33
PDX1-201ENST00000381033 PPARGP37231 505 aaPredicted RBP17.08■□□□□ 0.33
PDX1-201ENST00000381033 DPP6P42658 865 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 KPNA2P52292 529 aaKnown RBP17.08■□□□□ 0.33
PDX1-201ENST00000381033 TSNQ15631 228 aaKnown RBP17.08■□□□□ 0.33
PDX1-201ENST00000381033 Q6ZNB5 142 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 GK5Q6ZS86 529 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.08■□□□□ 0.33
PDX1-201ENST00000381033 USP13Q92995 863 aaPredicted RBP17.08■□□□□ 0.33
PDX1-201ENST00000381033 NPAS2Q99743 824 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 SARS2Q9NP81 518 aaKnown RBP17.08■□□□□ 0.33
PDX1-201ENST00000381033 CFAP97Q9P2B7 532 aa17.08■□□□□ 0.33
PDX1-201ENST00000381033 STOML2Q9UJZ1 356 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms