RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SIRPB2Q5JXA9 342 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 ALS2CLQ60I27 953 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 C19orf48Q6RUI8 117 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 KANSL1Q7Z3B3 1105 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 HEATR4Q86WZ0 1026 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 NRSN1Q8IZ57 195 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SLC25A45Q8N413 288 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 TAB3Q8N5C8 712 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 OR56A4Q8NGH8 313 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 MAIP1Q8WWC4 291 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SCAMP4Q969E2 229 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 CNDP2Q96KP4 475 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SRPK1Q96SB4 655 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 APOL2Q9BQE5 337 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 RIOK2Q9BVS4 552 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 LGR4Q9BXB1 951 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 FRMD8P1Q9BZ68 369 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SLC13A1Q9BZW2 595 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 TCEAL2Q9H3H9 227 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 FAM83DQ9H4H8 585 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 ZFYVE1Q9HBF4 777 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 MAGEE1Q9HCI5 957 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 PHPT1Q9NRX4 125 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 PKD2L2Q9NZM6 624 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 APOBEC3BQ9UH17 382 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 KLF15Q9UIH9 416 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF148Q9UQR1 794 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 APOBEC2Q9Y235 224 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 AAR2Q9Y312 384 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SPO11Q9Y5K1 396 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 TRPM6Q9BX84 2022 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 TMEM131Q92545 1883 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 NEMP2A6NFY4 417 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 TRIM38O00635 465 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 INPP4BO15327 924 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 AQP9O43315 295 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 TNFSF14O43557 240 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 DKK1O94907 266 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 METTL18O95568 372 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 TNFP01375 233 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 IFNB1P01574 187 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 EPOP01588 193 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 ATXN1LP0C7T5 689 aaKnown RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 ALPPL2P10696 532 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 MYCLP1P12525 358 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 CTSEP14091 401 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 HLA-DPA1P20036 260 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 MSNP26038 577 aaKnown RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 TRIM23P36406 574 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 SPINT3P49223 89 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 GDF10P55107 478 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 CDK3Q00526 305 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 DPTQ07507 201 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 SPARCL1Q14515 664 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PARP6Q2NL67 630 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 DEFB133Q30KQ1 61 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 DOK6Q6PKX4 331 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF765Q7L2R6 523 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PNPLA1Q8N8W4 532 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF548Q8NEK5 533 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 BAHD1Q8TBE0 780 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 BLOC1S5Q8TDH9 187 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 OR1E3Q8WZA6 343 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 LRRC45Q96CN5 670 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PDXPQ96GD0 296 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 BBC3Q96PG8 261 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PPP1R2P1Q96PQ5 205 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 AGAP2Q99490 1192 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 GORASP1Q9BQQ3 440 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 TEX101Q9BY14 249 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 CYP4F12Q9HCS2 524 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 FGF22Q9HCT0 170 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 BPIFA1Q9NP55 256 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 MRPL40Q9NQ50 206 aaKnown RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PNMA8BQ9ULN7 279 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-202ENST00000380747 PYCARDQ9ULZ3 195 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 DOCK9Q9BZ29 2069 aa9.19□□□□□ -0.94
HMGN1-202ENST00000380747 RGSL1A5PLK6 1076 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 AURKAO14965 403 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 SIGLEC6O43699 453 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 BUD23O43709 281 aaKnown RBP9.18□□□□□ -0.94
HMGN1-202ENST00000380747 GCATO75600 419 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 ATP1A1P05023 1023 aaKnown RBP9.18□□□□□ -0.94
HMGN1-202ENST00000380747 FGF1P05230 155 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 PYGLP06737 847 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 ANXA6P08133 673 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 HOXC4P09017 264 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-202ENST00000380747 TEAD1P28347 426 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 STIP1P31948 543 aaKnown RBP9.18□□□□□ -0.94
HMGN1-202ENST00000380747 ACTN2P35609 894 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 BLKP51451 505 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 HK3P52790 923 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 DAB2P98082 770 aa9.18□□□□□ -0.94
HMGN1-202ENST00000380747 DNAJC3Q13217 504 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms