RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 MUS81Q96NY9 551 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 STN1Q9H668 368 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 UBE2ZQ9H832 354 aaPredicted RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 RRN3Q9NYV6 651 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 APOBEC2Q9Y235 224 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 TIMM13Q9Y5L4 95 aaPredicted RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 YJEFN3A6XGL0 299 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 NDUFB5O43674 189 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 ZBED1O96006 694 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 GPD1P21695 349 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 NR4A2P43354 598 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 SLC7A2P52569 658 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 SEPT7Q16181 437 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 DPYSL2Q16555 572 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 CLLU1OSQ5K130 101 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 ACBD5Q5T8D3 534 aaPredicted RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 WDR49Q8IV35 697 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 PPFIBP2Q8ND30 876 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 ISL2Q96A47 359 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 VPS39Q96JC1 886 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 RSL24D1Q9UHA3 163 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 PLCE1Q9P212 2302 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 TADA2AO75478 443 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 URODP06132 367 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 ADH1AP07327 375 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 ADORA2BP29275 332 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 CDK9P50750 372 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 SLC13A2Q13183 592 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 POU6F1Q14863 301 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 VASH1Q7L8A9 365 aaPredicted RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 MAP7D3Q8IWC1 876 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 APPL2Q8NEU8 664 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 HTR3CQ8WXA8 447 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 PYCR2Q96C36 320 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 PRRX2Q99811 253 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 RTKNQ9BST9 563 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 NXF3Q9H4D5 531 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 ACTL8Q9H568 366 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 TBC1D13Q9NVG8 400 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 UBQLN1Q9UMX0 589 aaKnown RBP7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 DMTF1Q9Y222 760 aa7.34□□□□□ -1.23
GPCPD1-201ENST00000379019 TCRBV5S2A0A599 114 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 THP07101 528 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 ZNF24P17028 368 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 TYMPP19971 482 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 PRDX6P30041 224 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 LSM3P62310 102 aaKnown RBP7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 VARS2Q5ST30 1063 aaKnown RBP7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 TMEM53Q6P2H8 277 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 CEP128Q6ZU80 1094 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 COLGALT2Q8IYK4 626 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 CACTIN-AS1Q8N1I8 211 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 ALKBH8Q96BT7 664 aaKnown RBP7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 QKIQ96PU8 341 aaKnown RBP eCLIP7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 FERMT1Q9BQL6 677 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 CENPKQ9BS16 269 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 PAIP1Q9H074 479 aaKnown RBP7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 SFXN1Q9H9B4 322 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 CROTQ9UKG9 612 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 DNAJC15Q9Y5T4 150 aa7.34□□□□□ -1.24
GPCPD1-201ENST00000379019 KRBA1A5PL33 1030 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 C8BP07358 591 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 MTHFD2P13995 350 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ENOSF1Q7L5Y1 443 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 CLIP4Q8N3C7 705 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ZBTB8BQ8NAP8 495 aaPredicted RBP7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ELMO1Q92556 727 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 CNDP1Q96KN2 507 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 NMRAL1Q9HBL8 299 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 TLR8Q9NR97 1041 aaKnown RBP7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 URB1O60287 2271 aaKnown RBP7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 SLC12A8A0AV02 714 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 GRXCR1A8MXD5 290 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 DCLK1O15075 740 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 BIRC5O15392 142 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 INMTO95050 263 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 LRPAP1P30533 357 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 SLC1A2P43004 574 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 SLC14A1Q13336 389 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 DNAL1Q4LDG9 190 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 TMEM236Q5W0B7 351 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 TPGS2Q68CL5 300 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 REP15Q6BDI9 236 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ZNF549Q6P9A3 640 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 VN1R2Q8NFZ6 395 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 PLEKHA8Q96JA3 519 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 BTBD9Q96Q07 612 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 TMEM209Q96SK2 561 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ACOX2Q99424 681 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ANKRD60Q9BZ19 345 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 SMURF2Q9HAU4 748 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 MRPL17Q9NRX2 175 aaKnown RBP7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 TSPAN3O60637 253 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 KRT37O76014 449 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 ITGB1P05556 798 aa7.33□□□□□ -1.24
GPCPD1-201ENST00000379019 CALB1P05937 261 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms