RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 S100PBPQ96BU1 408 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 NAT9Q9BTE0 207 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 RANBP3Q9H6Z4 567 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 SNX15Q9NRS6 342 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 VAV3Q9UKW4 847 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CNOT6Q9ULM6 557 aaKnown RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 PCDHGA7Q9Y5G6 932 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 KCNK1O00180 336 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ORC5O43913 435 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 TCF4P15884 667 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 DDX6P26196 483 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 EEF1A1P68104 462 aaKnown RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 EEF1A2Q05639 463 aaKnown RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 TNK2Q07912 1038 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 SPP2Q13103 211 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 EEF1A1P5Q5VTE0 462 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 LINC00299Q6ZSB3 139 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 PRSS42Q7Z5A4 293 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 EMC1Q8N766 993 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 TTLL6Q8N841 843 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 MYLPFQ96A32 169 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ACTL7AQ9Y615 435 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 KIF1AQ12756 1690 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ASTN1O14525 1302 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 SDR42E2A6NKP2 422 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 EI24O14681 340 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ST8SIA5O15466 376 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 SOAT2O75908 522 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CTNNB1P35222 781 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ARHGDIBP52566 201 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 RHDQ02161 417 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 GRSF1Q12849 480 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 POU4F3Q15319 338 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 BMT2Q1RMZ1 405 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CHSY3Q70JA7 882 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 FAM151AQ8WW52 585 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 INTS12Q96CB8 462 aaKnown RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CNDP2Q96KP4 475 aaKnown RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 RNF145Q96MT1 663 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 PCDH9Q9HC56 1237 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 NECTIN3Q9NQS3 549 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 RIMS3Q9UJD0 308 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CDH9Q9ULB4 789 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ETV5P41161 510 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 MAGEA11P43364 429 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 MAZP56270 477 aaKnown RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 NOMO3P69849 1222 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CCNA1P78396 465 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ACAD9Q9H845 621 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CCNB1IP1Q9NPC3 277 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 GPRC5CQ9NQ84 441 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PLSCR3Q9NRY6 295 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 BFARQ9NZS9 450 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 MGAT4BQ9UQ53 548 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 A0A1B0GTW7 788 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 FCER2P06734 321 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 RETP07949 1114 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 S100PP25815 95 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CD79BP40259 229 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 BAATQ14032 418 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TEAD4Q15561 434 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 SETMARQ53H47 684 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TFDP3Q5H9I0 405 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 GPAT2Q6NUI2 795 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 BRAT1Q6PJG6 821 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 MCOLN2Q8IZK6 566 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 IPCEF1Q8WWN9 437 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 C1orf74Q96LT6 269 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ZSWIM3Q96MP5 696 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TRNT1Q96Q11 434 aaKnown RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 IL12RB2Q99665 862 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ROGDIQ9GZN7 287 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 NIF3L1Q9GZT8 377 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 LHPPQ9H008 270 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ACP6Q9NPH0 428 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CD93Q9NPY3 652 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 SMOXQ9NWM0 555 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CRTAPO75718 401 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ZBTB7AO95365 584 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 GLRA2P23416 452 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 BMPR1AP36894 532 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ELK3P41970 407 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PIK3CBP42338 1070 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ERVK-25P63136 954 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PYDC2Q56P42 97 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PAN3Q58A45 887 aaKnown RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ARHGAP17Q68EM7 881 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PNCKQ6P2M8 343 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TMPRSS11AQ6ZMR5 421 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 GADL1Q6ZQY3 521 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 C1orf186Q6ZWK4 172 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ZC3HC1Q86WB0 502 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms