RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 XAB2Q9HCS7 855 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 SMOXQ9NWM0 555 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PIH1D1Q9NWS0 290 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 APOBEC3BQ9UH17 382 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 KLF15Q9UIH9 416 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 KCTD3Q9Y597 815 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 MYLKQ15746 1914 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PRSS38A1L453 326 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 GPR89AB7ZAQ6 455 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 SMAPO00193 183 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 DNALI1O14645 258 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 NDC80O14777 642 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 INPP4BO15327 924 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 GPR89BP0CG08 455 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 IL9RQ01113 521 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 BNIP3Q12983 259 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PCID2Q5JVF3 399 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 CERCAMQ5T4B2 595 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 FAM151BQ6UXP7 276 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PHYKPLQ8IUZ5 450 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 HID1Q8IV36 788 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 NAT8LQ8N9F0 302 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 OR1E3Q8WZA6 343 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 TSACCQ96A04 125 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 TRIM39Q9HCM9 518 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 FGF22Q9HCT0 170 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PNMA8BQ9ULN7 279 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 TCRBV7S3A2A0A539 114 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 FAM187AA6NFU0 413 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 GAPDHSO14556 408 aaPredicted RBP13.13□□□□□ -0.31
CKAP2-202ENST00000378034 AQP9O43315 295 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 SRP72O76094 671 aaKnown RBP13.13□□□□□ -0.31
CKAP2-202ENST00000378034 CTSEP14091 401 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.31
CKAP2-202ENST00000378034 PTPRCAPQ14761 206 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 ELOCQ15369 112 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 CHRNA6Q15825 494 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 RNASEH2BQ5TBB1 312 aaKnown RBP13.13□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF534Q76KX8 674 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF548Q8NEK5 533 aaPredicted RBP13.13□□□□□ -0.31
CKAP2-202ENST00000378034 OR13C4Q8NGS5 318 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF398Q8TD17 642 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 FKBPLQ9UIM3 349 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
CKAP2-202ENST00000378034 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
CKAP2-202ENST00000378034 TPP1O14773 563 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SCAMP1O15126 338 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TTI1O43156 1089 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 VEGFDO43915 354 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TMEM63AO94886 807 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 PRAMEF1O95521 474 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ALPPL2P10696 532 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 IVDP26440 423 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SESN2P58004 480 aaPredicted RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 XIAPP98170 497 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 LDLRAP1Q5SW96 308 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TSTD2Q5T7W7 516 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 GATAD2AQ86YP4 633 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SLC25A45Q8N413 288 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ULK4Q96C45 1275 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 PDXPQ96GD0 296 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 CDKN2AIPNLQ96HQ2 116 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 DNAJC1Q96KC8 554 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 CDC6Q99741 560 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 MRM3Q9HC36 420 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TRNAU1APQ9NX07 287 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 COL5A1P20908 1838 aaPredicted RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 MAGEB16A2A368 324 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SH3BP5O60239 455 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SDC3O75056 442 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ASMTLO95671 621 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ITGALP20701 1170 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 ACVR1Q04771 509 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 NFATC2Q13469 925 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 PRRT3Q5FWE3 981 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 TRIM74Q86UV6 250 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
CKAP2-202ENST00000378034 RBFAQ8N0V3 343 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 MNS1Q8NEH6 495 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 DDHD1Q8NEL9 900 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
CKAP2-202ENST00000378034 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms