RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 RIMS3Q9UJD0 308 aa9.03□□□□□ -0.96
CRNKL1-201ENST00000377327 SNX7Q9UNH6 387 aa9.03□□□□□ -0.96
CRNKL1-201ENST00000377327 MAPRE3Q9UPY8 281 aa9.03□□□□□ -0.96
CRNKL1-201ENST00000377327 SYNDIG1LA6NDD5 238 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 DNAJB5O75953 348 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 RASAL1O95294 804 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 MYL3P08590 195 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 INSRRP14616 1297 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 NPR3P17342 541 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 PTPN3P26045 913 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ELK4P28324 431 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 PTGS2P35354 604 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 SLC15A1P46059 708 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ARSFP54793 590 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 WNT3AP56704 352 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 NRG1Q02297 640 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 MVKQ03426 396 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 LCP2Q13094 533 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ANGPT1Q15389 498 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 MEP1AQ16819 746 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 SLC39A4Q6P5W5 647 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ABHD15Q6UXT9 468 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 OTOP3Q7RTS5 596 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 TFAP2DQ7Z6R9 452 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 RIOX2Q8IUF8 465 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 SCML4Q8N228 414 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CCDC185Q8N715 623 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 HDAC2Q92769 488 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 AURKBQ96GD4 344 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 GAD1Q99259 594 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 OSBPL10Q9BXB5 764 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF408Q9H9D4 720 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ANKHQ9HCJ1 492 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 POLE4Q9NR33 117 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ZNF624Q9P2J8 865 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 OPTCQ9UBM4 332 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 HEMK1Q9Y5R4 338 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 B4GALT5O43286 388 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 HOXA10P31260 410 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 FMO3P31513 532 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CCR10P46092 362 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 LHX1P48742 406 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CSNK2BP67870 215 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 DACT2Q5SW24 774 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 ZCCHC8Q6NZY4 707 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 EIF3MQ7L2H7 374 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 SLC44A2Q8IWA5 706 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 DCP1BQ8IZD4 617 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 TTC29Q8NA56 475 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 PIK3C3Q8NEB9 887 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 OR5K1Q8NHB7 308 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 COPS4Q9BT78 406 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 MAF1Q9H063 256 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 SACM1LQ9NTJ5 587 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 VPS28Q9UK41 221 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 FAM172BPA6NC97 362 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 NTRK1P04629 796 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CYP11A1P05108 521 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CYP2C18P33260 490 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CD86P42081 329 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 SRP54P61011 504 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 VBP1P61758 197 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CLCQ05315 142 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 LY6KQ17RY6 165 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 PRR23CQ6ZRP0 262 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 IGFN1Q86VF2 1251 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CYP4Z1Q86W10 505 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 AP3S1Q92572 193 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 VPS35Q96QK1 796 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 GPR22Q99680 433 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 OGDHLQ9ULD0 1010 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 KDM3BQ7LBC6 1761 aa9.02□□□□□ -0.97
CRNKL1-201ENST00000377327 CENPBD1B2RD01 187 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 PLOD3O60568 738 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 NPM3O75607 178 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 RGS20O76081 388 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 F7P08709 466 aaPredicted RBP9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 SPATA31D3P0C874 917 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 PABPC1P11940 636 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 ATF4P18848 351 aaPredicted RBP9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 HDCP19113 662 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 PSMA1P25786 263 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 CHRNA5P30532 468 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 GLUD2P49448 558 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 NUMBP49757 651 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 FOXM1Q08050 763 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 AP5B1Q2VPB7 878 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 BICRALQ6AI39 1079 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 SPATA31D4Q6ZUB0 917 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 ZC3HC1Q86WB0 502 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 HID1Q8IV36 788 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 METTL25Q8N6Q8 603 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 REPS2Q8NFH8 660 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 OR10A6Q8NH74 314 aa9.01□□□□□ -0.97
CRNKL1-201ENST00000377327 BIRC7Q96CA5 298 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms