RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	BOC	Q9BWV1	1114 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	VIPAS39	Q9H9C1	493 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	TMEM216	Q9P0N5	145 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SLC24A2	Q9UI40	661 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	LNPEP	Q9UIQ6	1025 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	KRT87P	A6NCN2	255 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	PRRT4	C9JH25	899 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ZBTB14	O43829	449 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	TM7SF2	O76062	418 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	CHRM1	P11229	460 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	HTR1B	P28222	390 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	MAPK8	P45983	427 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	TTPA	P49638	278 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ZXDB	P98169	803 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	QPCT	Q16769	361 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	TSSK4	Q6SA08	328 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	C10orf107	Q8IVU9	208 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	PRSS58	Q8IYP2	241 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	METTL6	Q8TCB7	284 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	RELT	Q969Z4	430 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	CLIP3	Q96DZ5	547 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	SIGLEC10	Q96LC7	697 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	FERD3L	Q96RJ6	166 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	SENP1	Q9P0U3	644 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	SPAG17	Q6Q759	2223 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ACACA	Q13085	2346 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	PSME4	Q14997	1843 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ABCA7	Q8IZY2	2146 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	USP1	O94782	785 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ALDH4A1	P30038	563 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	IL12RB1	P42701	662 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	KCNJ11	Q14654	390 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	DUSP6	Q16828	381 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	MTSS1L	Q765P7	747 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	PARG	Q86W56	976 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	CXorf40B	Q96DE9	158 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	LENG8	Q96PV6	779 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	BTBD1	Q9H0C5	482 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	CACNB4	O00305	520 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	PEX11A	O75192	247 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF8	P17098	575 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	TEX9	Q8N6V9	391 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF557	Q8N988	423 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	STMN2	Q93045	179 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	ASB16	Q96NS5	453 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	POLM	Q9NP87	494 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-225	ENST00000376568	HEY2	Q9UBP5	337 aa		13.47	□□□□□ -0.25
DDR1-225	ENST00000376568		A0A1W2PQU0	124 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	WNT9A	O14904	365 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	TPSB2	P20231	275 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	EFNA1	P20827	205 aa	Predicted RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	HSPA7	P48741	367 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	HCAR3	P49019	387 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	METAP1	P53582	386 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	RAB10	P61026	200 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	HTRA4	P83105	476 aa	Predicted RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	CAPRIN1	Q14444	709 aa	Known RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	NR6A1	Q15406	480 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	TPSAB1	Q15661	275 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	VWA5B1	Q5TIE3	1220 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	PSAPL1	Q6NUJ1	521 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	MCOLN3	Q8TDD5	553 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	MRPS17	Q9Y2R5	130 aa	Known RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	UBXN8	O00124	270 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	CCR10	P46092	362 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	MESP2	Q0VG99	397 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	CUL3	Q13618	768 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	AGBL2	Q5U5Z8	902 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	PDE12	Q6L8Q7	609 aa	Known RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	NLRP9	Q7RTR0	991 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	EFCAB3	Q8N7B9	438 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	PPFIBP2	Q8ND30	876 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	FAM46D	Q8NEK8	389 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	CLP1	Q92989	425 aa	Known RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	CDK15	Q96Q40	435 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	NSMCE4A	Q9NXX6	385 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	PRDM4	Q9UKN5	801 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	NENF	Q9UMX5	172 aa		13.46	□□□□□ -0.25
DDR1-225	ENST00000376568	FAM237B	A0A1B0GVD1	139 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	ABCB1	P08183	1280 aa	Predicted RBP	13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	CNTN1	Q12860	1018 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	PRKD1	Q15139	912 aa	Predicted RBP	13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	UGT3A1	Q6NUS8	523 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	GPR149	Q86SP6	731 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	FIBIN	Q8TAL6	211 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	ZNF473	Q8WTR7	871 aa	Known RBP	13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	TMEM174	Q8WUU8	243 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	PIGK	Q92643	395 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	LRRC39	Q96DD0	335 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	SGSM3	Q96HU1	749 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	CATSPER2	Q96P56	530 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	RXFP1	Q9HBX9	757 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	DCDC2	Q9UHG0	476 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	CACNA1I	Q9P0X4	2223 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	RLF	Q13129	1914 aa		13.46	□□□□□ -0.26
DDR1-225	ENST00000376568	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.45	□□□□□ -0.26
DDR1-225	ENST00000376568	GNG14	A0A1W2PPG7	69 aa		13.45	□□□□□ -0.26
DDR1-225	ENST00000376568	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.45	□□□□□ -0.26

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